Pre_GI: BLASTP Hits

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Query: NC_017249:7917586:7928434 Bradyrhizobium japonicum USDA 6, complete genome

Start: 7928434, End: 7929954, Length: 1521

Host Lineage: Bradyrhizobium japonicum; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This nitrogen-fixing bacterium develops a symbiotic relationship with the soybean plant Glycine max and is related to other N2-fixing Rhizobia which are symbiotic with legumes. The bacterium establishes itself in a root nodule which provides a protective environment for the organism to live while the bacterium provides the plant cell with nitrogen. This is an agriculturally important symbiotic relationship as it obviates the need for expensive and environmentally damaging fertilizer.Genes that code for proteins involved in root nodulation are carried on the chromosome. The production of the nodulation signal, lipochitin, is directed by genes which are turned on in the presence of plant flavonoid compounds. The bacteria are endocytosed into a cortical cell, and are enclosed within a membrane bound organelle termed the symbiosome.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004463:2344128:2352229235222923537491521Bradyrhizobium japonicum USDA 110, complete genomehypothetical protein0891
NC_014924:2399524:2399524239952424010351512Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomeputative circadian clock protein, KaiC1e-167589
NC_014931:3886405:3897738389773838992401503Variovorax paradoxus EPS chromosome, complete genomeputative circadian clock protein, KaiC3e-132472
NC_010511:6485500:6511121651112165126291509Methylobacterium sp. 4-46 chromosome, complete genomecircadian clock protein KaiC1e-130467
NC_010511:5169338:5184223518422351857461524Methylobacterium sp. 4-46 chromosome, complete genomenon-specific serine/threonine protein kinase6e-126451
NC_011071:1178423:1176937117693711784331497Stenotrophomonas maltophilia R551-3, complete genomeNon-specific serine/threonine protein kinase4e-124445
NC_020209:1903830:1922400192240019239021503Pseudomonas poae RE*1-1-14, complete genomeKaiC domain protein5e-124444
NC_016626:1669477:1673977167397716754821506Burkholderia sp. YI23 plasmid byi_1p, complete sequencenon-specific serine/threonine protein kinase1e-122440
NC_016010:1822212:1900542190054219020591518Xanthomonas axonopodis pv. citrumelo F1 chromosome, completeRecA/DnaB superfamily regulatory protein1e-117423
NC_020388:1428042:1429596142959614310531458Natronomonas moolapensis 8.8.11 complete genomeprobable KaiC-like transcription regulator5e-48192
NC_013161:4093322:4097308409730840988311524Cyanothece sp. PCC 8802, complete genomeputative circadian clock protein, KaiC2e-32140
NC_014248:5196353:5203530520353052050741545Nostoc azollae 0708 chromosome, complete genomeputative circadian clock protein KaiC1e-24114
NC_007516:1947214:1947214194721419487521539Synechococcus sp. CC9605, complete genomecircadian clock protein KaiC5e-24112
NC_008319:1950889:1954369195436919559041536Synechococcus sp. CC9311, complete genomecircadian clock protein KaiC1e-23111
NC_007958:830000:8302378302378319251689Rhodopseudomonas palustris BisB5, complete genomeKaiC2e-23110
NC_010424:697187:7231787231787245811404Candidatus Desulforudis audaxviator MP104C, complete genomeputative circadian clock protein, KaiC6e-23109
NC_003901:1268995:1282724128272412841481425Methanosarcina mazei Go1, complete genomecircadian clock protein KaiC2e-22107
NC_020389:1083517:1094404109440410959091506Methanosarcina mazei Tuc01, complete genomeCircadian clock protein KaiC9e-22105
NC_019977:253895:2621032621032634791377Methanomethylovorans hollandica DSM 15978, complete genomeRecA-superfamily ATPase possibly involved in signal transduction2e-21103
NC_015942:2060349:2067742206774220692231482Acidithiobacillus ferrivorans SS3 chromosome, complete genomeputative circadian clock protein, KaiC3e-21103
NC_013741:1144592:1163887116388711652211335Archaeoglobus profundus DSM 5631, complete genomeputative circadian clock protein, KaiC8e-1995.5
NC_014408:1340016:1360501136050113619101410Methanothermobacter marburgensis str. Marburg chromosome, completeKaiC-related protein1e-1791.7
NC_015320:1399589:142095414209541421646693Archaeoglobus veneficus SNP6 chromosome, complete genomeputative circadian clock protein KaiC1e-1481.3
NC_011529:806000:815677815677816381705Thermococcus onnurineus NA1, complete genomeATPase4e-1376.6
NC_012883:1603744:162462816246281625371744Thermococcus sibiricus MM 739, complete genomeKaiC domain protein5e-1169.7
NC_016051:1005188:102088510208851021589705Thermococcus sp. AM4 chromosome, complete genomecircadian clock protein KaiC2e-0860.8
NC_013741:1068170:107269010726901073451762Archaeoglobus profundus DSM 5631, complete genomeputative circadian clock protein, KaiC4e-0860.1
NC_015676:208393:222042222042222830789Methanosalsum zhilinae DSM 4017 chromosome, complete genomeputative circadian clock protein KaiC2e-0757.8
NC_009073:1:584558456618774Pyrobaculum calidifontis JCM 11548, complete genomeputative circadian clock protein, KaiC4e-0757
NC_016645:1838405:185264218526421853418777Pyrobaculum sp. 1860 chromosome, complete genomecircadian clock protein KaiC7e-0755.8
NC_016885:2091918:216964521696452170421777Pyrobaculum oguniense TE7 chromosome, complete genomeRecA-superfamily ATPases implicated in signal transduction1e-0655.1
NC_009376:2102536:211529521152952116071777Pyrobaculum arsenaticum DSM 13514 chromosome, complete genomecircadian clock protein KaiC1e-0655.1
NC_003364:402268:404887404887405663777Pyrobaculum aerophilum str. IM2, complete genomehypothetical protein1e-0655.1
NC_015562:1299648:132030013203001321025726Methanotorris igneus Kol 5 chromosome, complete genomeputative circadian clock protein, KaiC2e-0654.7
NC_009802:1077926:1094607109460710959471341Campylobacter concisus 13826, complete genomeDNA repair protein RadA3e-0653.9
NC_013156:127000:127346127346128086741Methanocaldococcus fervens AG86, complete genomeputative circadian clock protein, KaiC3e-0653.9
NC_015740:2407500:2413533241353324149451413Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completesignal transduction ATPase3e-0653.9
NC_009434:2577717:2582165258216525835771413Pseudomonas stutzeri A1501, complete genomesignal transduction ATPase3e-0653.5
NC_014374:1072218:115022211502221151013792Acidilobus saccharovorans 345-15 chromosome, complete genomepredicted ATPase4e-0653.5
NC_009706:165913:1860441860441873991356Clostridium kluyveri DSM 555 chromosome, complete genomeDNA repair protein RadA7e-0652.8
NC_011837:165913:1860441860441873991356Clostridium kluyveri NBRC 12016, complete genomeDNA repair protein RadA7e-0652.8
NC_013926:511674:532315532315533184870Aciduliprofundum boonei T469 chromosome, complete genomeputative circadian clock protein, KaiC5e-0652.8
NC_012781:2148478:2164835216483521662051371Eubacterium rectale ATCC 33656, complete genomeDNA repair protein RadA7e-0652.4
NC_009714:1118500:1118587111858711199301344Campylobacter hominis ATCC BAA-381, complete genomeDNA repair protein RadA9e-0652