Pre_GI: BLASTP Hits

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Query: NC_017249:7917586:7921602 Bradyrhizobium japonicum USDA 6, complete genome

Start: 7921602, End: 7922600, Length: 999

Host Lineage: Bradyrhizobium japonicum; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This nitrogen-fixing bacterium develops a symbiotic relationship with the soybean plant Glycine max and is related to other N2-fixing Rhizobia which are symbiotic with legumes. The bacterium establishes itself in a root nodule which provides a protective environment for the organism to live while the bacterium provides the plant cell with nitrogen. This is an agriculturally important symbiotic relationship as it obviates the need for expensive and environmentally damaging fertilizer.Genes that code for proteins involved in root nodulation are carried on the chromosome. The production of the nodulation signal, lipochitin, is directed by genes which are turned on in the presence of plant flavonoid compounds. The bacteria are endocytosed into a cortical cell, and are enclosed within a membrane bound organelle termed the symbiosome.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004463:2344128:235958323595832360407825Bradyrhizobium japonicum USDA 110, complete genomehypothetical protein4e-155547
NC_009050:427000:4364524364524390582607Rhodobacter sphaeroides ATCC 17029 chromosome 2, complete sequenceDEAD/DEAH box helicase domain protein7e-98357
NC_014623:9038177:9042672904267290452992628Stigmatella aurantiaca DW4/3-1 chromosome, complete genomedead/deah box helicase domain-containing protein7e-52204
NC_013521:2193203:2201802220180222043602559Sanguibacter keddieii DSM 10542, complete genomesuperfamily II helicase1e-44180
NC_014500:443874:4534484534484560242577Dickeya dadantii 3937 chromosome, complete genomehelicase conserved C-terminal domain-containing protein1e-40167
NC_011080:4703266:4711108471110847136572550Salmonella enterica subsp. enterica serovar Newport str. SL254,putative dead/deah box helicase domain protein8e-40164
NC_020209:4312892:4319205431920543218352631Pseudomonas poae RE*1-1-14, complete genomedead/deah box helicase domain-containing protein2e-33142
NC_015633:1702000:1719470171947017219952526Vibrio anguillarum 775 chromosome chromosome I, complete sequenceATP-dependent DNA helicase2e-31136
NC_014393:2868846:2868846286884628713472502Clostridium cellulovorans 743B chromosome, complete genomeDEAD/DEAH box helicase domain-containing protein5e-24112
NC_014323:5051041:5059892505989250624652574Herbaspirillum seropedicae SmR1 chromosome, complete genomeDNA helicase5e-22105
NC_010334:1701957:1712142171214217146552514Shewanella halifaxensis HAW-EB4, complete genomehelicase domain protein6e-2098.6
NC_015697:506494:5064945064945091062613Lactobacillus reuteri SD2112 chromosome, complete genomehypothetical protein9e-2097.8
NC_016584:954000:9723979723979749432547Desulfosporosinus orientis DSM 765 chromosome, complete genomesuperfamily II helicase6e-1892
NC_014828:1932971:1944957194495719476892733Ethanoligenens harbinense YUAN-3 chromosome, complete genomehelicase domain protein3e-1685.9
NC_011751:3048490:3059798305979830610001203Escherichia coli UMN026 chromosome, complete genomeputative ERCC4-like helicase6e-1478.6
NC_010334:2615260:2629510262951026317862277Shewanella halifaxensis HAW-EB4, complete genomehelicase domain protein3e-1376.3
NC_010995:4525119:4539346453934645425793234Cellvibrio japonicus Ueda107, complete genomeDEAD/DEAH box helicase1e-1067.8
NC_012912:1701231:1710394171039417126702277Dickeya zeae Ech1591, complete genomehelicase domain protein3e-1066.6
NC_015948:2367000:2374592237459223771982607Haloarcula hispanica ATCC 33960 chromosome chromosome I, completeDEAD/DEAH box helicase domain-containing protein8e-1064.7
NC_016906:181254:1876541876541912293576Gordonia polyisoprenivorans VH2 chromosome, complete genomeDEAD/DEAH box helicase5e-0962
NC_019791:638500:6490656490656511852121Caldisphaera lagunensis DSM 15908 chromosome, complete genomesuperfamily II helicase6e-0962
NC_015673:397947:4194264194264243844959Corynebacterium resistens DSM 45100 chromosome, complete genomeATP-dependent DNA helicase4e-0652.4
NC_015977:3011177:3022825302282530260643240Roseburia hominis A2-183 chromosome, complete genomehypothetical protein6e-0652