Pre_GI: BLASTP Hits

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Query: NC_017249:4398000:4409418 Bradyrhizobium japonicum USDA 6, complete genome

Start: 4409418, End: 4409834, Length: 417

Host Lineage: Bradyrhizobium japonicum; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This nitrogen-fixing bacterium develops a symbiotic relationship with the soybean plant Glycine max and is related to other N2-fixing Rhizobia which are symbiotic with legumes. The bacterium establishes itself in a root nodule which provides a protective environment for the organism to live while the bacterium provides the plant cell with nitrogen. This is an agriculturally important symbiotic relationship as it obviates the need for expensive and environmentally damaging fertilizer.Genes that code for proteins involved in root nodulation are carried on the chromosome. The production of the nodulation signal, lipochitin, is directed by genes which are turned on in the presence of plant flavonoid compounds. The bacteria are endocytosed into a cortical cell, and are enclosed within a membrane bound organelle termed the symbiosome.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011894:5751417:576284857628485763333486Methylobacterium nodulans ORS 2060, complete genomePRC-barrel domain protein1e-1581.6
NC_018000:2054098:206514220651422065537396Sinorhizobium fredii USDA 257 chromosome, complete genomehypothetical protein1e-1168.9
NC_011004:4073916:411693141169314117440510Rhodopseudomonas palustris TIE-1, complete genomePRC-barrel domain protein2e-1167.8
NC_018000:2054098:205710420571042057499396Sinorhizobium fredii USDA 257 chromosome, complete genomehypothetical protein2e-0961.2
NC_008543:2696377:271820127182012718629429Burkholderia cenocepacia HI2424 chromosome 2, complete sequencePRC-barrel domain protein5e-0856.6
NC_014217:16398:386893868939270582Starkeya novella DSM 506 chromosome, complete genomePRC-barrel domain protein5e-0753.1