Pre_GI: BLASTP Hits

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Query: NC_017221:535000:558962 Bifidobacterium longum subsp. longum KACC 91563 chromosome,

Start: 558962, End: 561250, Length: 2289

Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. This organism is found in adult humans and formula fed infants as a normal component of gut flora




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004307:2208591:2231468223146822337802313Bifidobacterium longum NCC2705, complete genomeprimosome assembly protein PriA01447
NC_010816:2326453:2350614235061423528122199Bifidobacterium longum DJO10A, complete genomePrimosomal protein N'-superfamily II helicase01411
NC_013715:1207774:1243039124303912454472409Rothia mucilaginosa DY-18, complete genomeprimosomal protein N' - superfamily II helicase3e-54213
NC_016789:1334514:1355064135506413570912028Corynebacterium diphtheriae PW8 chromosome, complete genomeprimosome assembly protein2e-52207
NC_002935:1315019:1335564133556413375912028Corynebacterium diphtheriae NCTC 13129, complete genomeprimosome assembly protein PriA5e-52206
NC_016783:1313008:1333553133355313355802028Corynebacterium diphtheriae INCA 402 chromosome, complete genomeprimosome assembly protein5e-52206
NC_016787:1276983:1298673129867313007002028Corynebacterium diphtheriae HC03 chromosome, complete genomeprimosome assembly protein5e-52206
NC_016790:1259356:1276052127605212780792028Corynebacterium diphtheriae VA01 chromosome, complete genomeprimosome assembly protein5e-52206
NC_016799:1343020:1364709136470913667362028Corynebacterium diphtheriae 31A chromosome, complete genomeprimosome assembly protein5e-52206
NC_007645:6096345:6113938611393861161782241Hahella chejuensis KCTC 2396, complete genomeprimosomal protein N'1e-1275.9
NC_009434:608765:6087656087656111612397Pseudomonas stutzeri A1501, complete genomeprimosome assembly protein PriA2e-1171.6
NC_015740:636667:6366676366676388892223Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeprimosome assembly protein PriA3e-1171.2
NC_008609:2840249:2840249284024928424832235Pelobacter propionicus DSM 2379, complete genomeprimosomal protein N'2e-1068.6