Pre_GI: BLASTP Hits

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Query: NC_017218:1655009:1666271 Bifidobacterium breve ACS-071-V-Sch8b chromosome, complete genome

Start: 1666271, End: 1666813, Length: 543

Host Lineage: Bifidobacterium breve; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. This organism is one of the first colonizers of the human gastrointestinal tract, and is a dominant member of the adult intestinal microbial community. Probiotics are live microbial supplements which benefit the health of an animal by maintaining normal microbial flora, producing vitamins, and stimulating the mucosal immune system




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013714:1830959:184184118418411842422582Bifidobacterium dentium Bd1, complete genomeCRISPR-associated Cas5 family protein1e-76285
NC_008618:1456000:146713414671341467856723Bifidobacterium adolescentis ATCC 15703, complete genomeCRISPR-associated protein_ CT11341e-68258
NC_009523:5438000:544741554474155448143729Roseiflexus sp. RS-1 chromosome, complete genomeCRISPR-associated Cas5 family protein2e-52204
NC_008942:815280:833847833847834560714Methanocorpusculum labreanum Z, complete genomehypothetical protein2e-50197
NC_006513:1949751:195906019590601959788729Azoarcus sp. EbN1, complete genomehypothetical protein5e-50196
NC_010995:2798000:280724328072432807947705Cellvibrio japonicus Ueda107, complete genomeCRISPR-associated protein Cas5, Dvulg subtype3e-44177
NC_016584:1912000:192058619205861921329744Desulfosporosinus orientis DSM 765 chromosome, complete genomeCRISPR-associated protein Cas5, subtype I-C/DVULG1e-43175
NC_010610:1385066:139867813986781399418741Lactobacillus fermentum IFO 3956, complete genomehypothetical protein7e-43172
NC_007759:2748000:275805827580582758828771Syntrophus aciditrophicus SB, complete genomehypothetical cytosolic protein9e-42169
NC_010381:92000:108027108027108755729Lysinibacillus sphaericus C3-41 plasmid pBsph, complete sequencehypothetical protein3e-39160
NC_021175:353292:359095359095359823729Streptococcus oligofermentans AS 1.3089, complete genomeCRISPR-associated protein cas57e-27120
NC_012470:1606000:161098616109861611729744Streptococcus equi subsp. zooepidemicus, complete genomeCRISPR-associated protein8e-26116
NC_016630:28410:357773577736520744Filifactor alocis ATCC 35896 chromosome, complete genomeCRISPR-associated protein Cas51e-23108