Pre_GI: BLASTP Hits

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Query: NC_017026:3894000:3907759 Mycobacterium tuberculosis RGTB327 chromosome, complete genome

Start: 3907759, End: 3908595, Length: 837

Host Lineage: Mycobacterium tuberculosis; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. This bacterium is the causative agent of tuberculosis - a chronic infectious disease with a growing incidence worldwide. It infects 1.7 billion people a year (~33% of the entire world population) and causes over 3 million deaths/year. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. The sluggish growth rate is a result of the tough cell wall that resists the passage of nutrients into the cell and inhibits waste products to be excreted out of the cell. The specialized cell envelope of this organism resembles a modified Gram positive cell wall. It also contains complex fatty acids, such as mycolic acids, that cause the waxy appearance and impermeability of the envelope. These acids are found bound to the cell envelope, but also form cord factors when linked with a carbohydrate component to form a cord-like structure. Primary infection occurs by inhalation of the organism in droplets that are aerosolized by an infected person. The organism initially replicates in cells of the terminal airways, after which it is taken up by, and replicates in, alveolar macrophages. Macrophages distribute the organism to other areas of the lungs and the regional lymph nodes. Once a cell-mediated hypersensitivity immune response develops, replication of the organism decreases and the bacteria become restricted to developing granulomas.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009525:3933567:394791239479123948748837Mycobacterium tuberculosis H37Ra, complete genomehypothetical protein7e-163572
NC_009953:3224412:324058332405833241395813Salinispora arenicola CNS-205 chromosome, complete genomeamidohydrolase 22e-96352
NC_015563:4206112:421638942163894217222834Delftia sp. Cs1-4 chromosome, complete genomeamidohydrolase 25e-75281
NC_015733:2658337:269726426972642697797534Pseudomonas putida S16 chromosome, complete genomeamidohydrolase 21e-34147
NC_013739:2106662:213442821344282135279852Conexibacter woesei DSM 14684, complete genomeamidohydrolase 25e-30131
NC_007907:456164:476637476637477575939Desulfitobacterium hafniense Y51, complete genomehypothetical protein2e-26119
NC_020126:6190662:619523261952326196041810Myxococcus stipitatus DSM 14675, complete genomeamidohydrolase 22e-25116
NC_008542:197500:197615197615198499885Burkholderia cenocepacia HI2424 chromosome 1, complete sequenceamidohydrolase 21e-21103
NC_010511:4258000:429704542970454297896852Methylobacterium sp. 4-46 chromosome, complete genomeamidohydrolase 22e-21102
NC_011892:77975:100135100135100998864Methylobacterium nodulans ORS 2060 plasmid pMNOD01, completeamidohydrolase 22e-21102
NC_003106:1809137:182269018226901823433744Sulfolobus tokodaii str. 7, complete genomehypothetical protein5e-1995.1
NC_011894:2747491:277269127726912773566876Methylobacterium nodulans ORS 2060, complete genomeamidohydrolase 26e-1891.3
NC_012792:310443:319261319261320094834Variovorax paradoxus S110 chromosome 2, complete genomeamidohydrolase 27e-1891.3
NC_020302:146807:156034156034156915882Corynebacterium halotolerans YIM 70093 = DSM 44683, completehypothetical protein8e-1787.8
NC_012623:2369671:239175823917582392567810Sulfolobus islandicus Y.N.15.51 chromosome, complete genomeamidohydrolase 24e-1582
NC_015125:2288487:231063723106372311539903Microbacterium testaceum StLB037, complete genomepredicted metal-dependent hydrolase of the TIM-barrel fold9e-1580.9
NC_015389:809474:838256838256839119864Coriobacterium glomerans PW2 chromosome, complete genomeamidohydrolase 22e-1480.1
NC_018645:4104302:411660941166094117526918Desulfobacula toluolica Tol2, complete genomeamidohydrolase5e-1375.1
NC_017047:2079368:210420921042092105129921Rahnella aquatilis HX2 chromosome, complete genomeamidohydrolase1e-1273.6
NC_007953:938346:952956952956953753798Burkholderia xenovorans LB400 chromosome 3, complete sequenceAmidohydrolase 27e-1168.2
NC_014363:1605349:161317716131771614031855Olsenella uli DSM 7084 chromosome, complete genomeamidohydrolase 21e-1067
NC_013744:462520:466649466649467530882Haloterrigena turkmenica DSM 5511 plasmid pHTUR01, completeamidohydrolase 25e-1065.1
NC_015957:10505870:105135621051356210514446885Streptomyces violaceusniger Tu 4113 chromosome, complete genomeamidohydrolase 21e-0964.3
NC_014817:29795:3493434934359711038Asticcacaulis excentricus CB 48 chromosome 2, complete sequenceamidohydrolase 22e-0963.5
NC_008148:3024867:304127530412753042015741Rubrobacter xylanophilus DSM 9941, complete genomeamidohydrolase 29e-0960.8
NC_016627:2593242:259324225932422594102861Clostridium clariflavum DSM 19732 chromosome, complete genomeputative TIM-barrel fold metal-dependent hydrolase1e-0860.8
NC_015474:538544:545173545173545919747Pyrococcus sp. NA2 chromosome, complete genomehypothetical protein1e-0860.5
NC_014623:6150028:615542061554206156418999Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeamidohydrolase 22e-0860.1
NC_003413:37233:483754837549118744Pyrococcus furiosus DSM 3638, complete genomemetal-dependent hydrolase4e-0858.9
NC_012588:742000:759527759527760390864Sulfolobus islandicus M.14.25 chromosome, complete genomeamidohydrolase 25e-0858.5
NC_014364:3001597:303052430305243031384861Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeamidohydrolase 21e-0757.4
NC_017047:2079368:210301721030172103964948Rahnella aquatilis HX2 chromosome, complete genomeamidohydrolase1e-0757
NC_010718:1865992:186927618692761870208933Natranaerobius thermophilus JW/NM-WN-LF, complete genomeamidohydrolase 22e-0757
NC_011961:528837:5304655304655314991035Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequenceamidohydrolase 24e-0755.5
NC_019892:806929:823049823049823963915Singulisphaera acidiphila DSM 18658 chromosome, complete genomeTIM-barrel fold metal-dependent hydrolase4e-0755.5
NC_013131:4422000:4445209444520944462701062Catenulispora acidiphila DSM 44928, complete genomeamidohydrolase 25e-0755.1
NC_011983:760113:765886765886766707822Agrobacterium radiobacter K84 chromosome 2, complete genomeAmidohydrolase protein9e-0754.3
NC_016604:3137694:3144459314445931455381080Mycobacterium rhodesiae NBB3 chromosome, complete genomeputative TIM-barrel fold metal-dependent hydrolase2e-0653.5