Pre_GI: BLASTP Hits

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Query: NC_016945:666000:666551 Vibrio cholerae IEC224 chromosome II, complete sequence

Start: 666551, End: 667660, Length: 1110

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: It was isolated in November of 1994 at the city of Belém/Pa from a stool sample. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013517:2055071:2076755207675520780291275Sebaldella termitidis ATCC 33386, complete genomehydroxymethylglutaryl-coenzyme A reductase7e-86317
NC_013887:1424000:1446026144602614472401215Methanocaldococcus sp. FS406-22 chromosome, complete genome3-hydroxy-3-methylglutaryl Coenzyme A reductase8e-66251
NC_015474:328500:3382453382453394711227Pyrococcus sp. NA2 chromosome, complete genome3-hydroxy-3-methylglutaryl coenzyme A reductase2e-63243
NC_015518:1160430:1177412117741211786411230Acidianus hospitalis W1 chromosome, complete genome3-hydroxy-3-methylglutaryl Coenzyme A reductase2e-60233
NC_003364:1282000:1290020129002012912161197Pyrobaculum aerophilum str. IM2, complete genome3-hydroxy-3-methylglutaryl-coenzyme A reductase (HMG-CoA reductase)3e-60232
NC_007681:657351:6761716761716773791209Methanosphaera stadtmanae DSM 3091, complete genomeHmgA1e-58227
NC_011832:2760000:2774908277490827761311224Candidatus Methanosphaerula palustris E1-9c, complete genome3-hydroxy-3-methylglutaryl Coenzyme A reductase1e-57223
NC_016609:6750111:6784471678447167867862316Niastella koreensis GR20-10 chromosome, complete genome3-hydroxy-3-methylglutaryl-coenzyme A reductase3e-47189
NC_009142:6199326:6239847623984762419342088Saccharopolyspora erythraea NRRL 2338, complete genomehypothetical protein with pantoate--beta-alanine ligase and Hydroxymethylglutaryl-coenzyme A reductase domains2e-28126
NC_016884:157894:1701031701031713951293Sulfobacillus acidophilus DSM 10332 chromosome, complete genome3-hydroxy-3-methylglutaryl-coenzyme A reductase8e-1891.7
NC_015757:158014:1774441774441787361293Sulfobacillus acidophilus TPY chromosome, complete genomehydroxymethylglutaryl-CoA reductase (NADPH)8e-1891.7
NC_015978:352478:3775883775883788441257Lactobacillus sanfranciscensis TMW 1.1304 chromosome, complete3-hydroxy-3-methylglutaryl-coenzyme A reductase2e-0757.4