Pre_GI: BLASTP Hits

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Query: NC_016944:168530:183955 Vibrio cholerae IEC224 chromosome I, complete sequence

Start: 183955, End: 184386, Length: 432

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: It was isolated in November of 1994 at the city of Belém/Pa from a stool sample. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_002505:168532:183957183957184388432Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completehypothetical protein4e-77285
NC_015633:338000:345558345558346010453Vibrio anguillarum 775 chromosome chromosome I, complete sequencehypothetical protein4e-61233
NC_011663:5016488:502754450275445027984441Shewanella baltica OS223 chromosome, complete genomehypothetical protein1e-1994.7
NC_016901:5130147:514074551407455141203459Shewanella baltica OS678 chromosome, complete genomehypothetical protein8e-1889
NC_009665:5072413:508299650829965083454459Shewanella baltica OS185 chromosome, complete genomehypothetical protein8e-1889
NC_009997:5188221:520012352001235200581459Shewanella baltica OS195, complete genomehypothetical protein8e-1889
NC_006856:95830:106868106868107308441Salmonella enterica subsp. enterica serovar Choleraesuis strhypothetical protein2e-0858.2
NC_018678:554675:566300566300566755456Alteromonas macleodii str. 'English Channel 673' chromosome,hypothetical protein1e-0651.6