Pre_GI: BLASTP Hits

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Query: NC_016944:168530:183477 Vibrio cholerae IEC224 chromosome I, complete sequence

Start: 183477, End: 183944, Length: 468

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: It was isolated in November of 1994 at the city of Belém/Pa from a stool sample. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016445:2593800:260874426087442609214471Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completehypothetical protein2e-86317
NC_002505:168532:183476183476183946471Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completehypothetical protein2e-86317
NC_009348:1064664:108058010805801081044465Aeromonas salmonicida subsp. salmonicida A449, complete genomehypothetical protein3e-44177
NC_016609:7427500:745209074520907452590501Niastella koreensis GR20-10 chromosome, complete genomehypothetical protein2e-1891.3
NC_015660:1896904:190366919036691904139471Geobacillus thermoglucosidasius C56-YS93 chromosome, completehypothetical protein3e-1684
NC_010634:4463727:447885044788504479344495Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein1e-1478.6
NC_010334:2131939:214541321454132145886474Shewanella halifaxensis HAW-EB4, complete genomehypothetical protein1e-1375.5
NC_014650:1862165:187872818787281879153426Geobacillus sp. Y4.1MC1 chromosome, complete genomehypothetical protein2e-1374.7
NC_013921:1915377:191704319170431917561519Thermoanaerobacter italicus Ab9 chromosome, complete genomehypothetical protein1e-1272
NC_008573:195317:238479238479238871393Shewanella sp. ANA-3 plasmid 1, complete sequencehypothetical protein6e-1270.1
NC_020418:1841138:185084918508491851319471Morganella morganii subsp. morganii KT, complete genomehypothetical protein2e-1065.1
NC_010725:5491491:550698755069875507454468Methylobacterium populi BJ001, complete genomehypothetical protein2e-0755.1