Pre_GI: BLASTP Hits

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Query: NC_016944:168530:177871 Vibrio cholerae IEC224 chromosome I, complete sequence

Start: 177871, End: 178422, Length: 552

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: It was isolated in November of 1994 at the city of Belém/Pa from a stool sample. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016445:2593800:260312926031292603692564Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completehypothetical protein4e-102370
NC_002505:168532:177861177861178424564Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completehypothetical protein4e-102370
NC_008322:4611000:461939646193964619923528Shewanella sp. MR-7, complete genomehypothetical protein2e-32138
NC_004459:3243987:326487532648753265363489Vibrio vulnificus CMCP6 chromosome I, complete sequenceResponse regulator5e-29127
NC_010506:4873487:488827648882764888803528Shewanella woodyi ATCC 51908, complete genomehypothetical protein2e-1168.6
NC_009901:2272206:229998022999802300519540Shewanella pealeana ATCC 700345, complete genomeconserved hypothetical protein1e-1065.9
NC_009901:4216206:422533642253364225875540Shewanella pealeana ATCC 700345, complete genomeconserved hypothetical protein1e-1065.9
NC_010334:609636:627047627047627586540Shewanella halifaxensis HAW-EB4, complete genomehypothetical protein3e-1064.7
NC_016901:5130147:515206651520665152608543Shewanella baltica OS678 chromosome, complete genomehypothetical protein3e-0858.2
NC_009665:5072413:509431750943175094859543Shewanella baltica OS185 chromosome, complete genomehypothetical protein3e-0858.2
NC_009997:5188221:521144452114445211986543Shewanella baltica OS195, complete genomehypothetical protein3e-0858.2