Pre_GI: BLASTP Hits

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Query: NC_016944:1621575:1631555 Vibrio cholerae IEC224 chromosome I, complete sequence

Start: 1631555, End: 1631935, Length: 381

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: It was isolated in November of 1994 at the city of Belém/Pa from a stool sample. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007929:785875:805250805250805576327Lactobacillus salivarius subsp. salivarius UCC118, complete genomePhage endonuclease1e-0961.6
NC_014393:937000:951789951789952181393Clostridium cellulovorans 743B chromosome, complete genomeHNH endonuclease6e-0959.3
NC_015519:2526047:252635225263522526738387Tepidanaerobacter sp. Re1 chromosome, complete genomeHNH endonuclease3e-0857
NC_009674:2678932:269927626992762699659384Bacillus cytotoxicus NVH 391-98 chromosome, complete genomeHNH endonuclease4e-0857
NC_015660:739040:759154759154759552399Geobacillus thermoglucosidasius C56-YS93 chromosome, completeHNH endonuclease4e-0856.6
NC_011773:4141765:416371441637144164031318Bacillus cereus AH820 chromosome, complete genomeHNH endonuclease2e-0754.7
UCMB5137:120656:131475131475131843369Bacillus atrophaeus UCMB-5137prophage Lp3 protein 125e-0753.1
NC_020272:1311932:133775513377551338120366Bacillus amyloliquefaciens IT-45, complete genomeHNH endonuclease9e-0752.4
NC_016052:1839763:184422518442251844764540Tetragenococcus halophilus NBRC 12172, complete genomehypothetical protein1e-0651.6
NC_020164:1677452:169767616976761697990315Staphylococcus warneri SG1, complete genomephage protein1e-0651.6
NC_015519:2489728:249385924938592494239381Tepidanaerobacter sp. Re1 chromosome, complete genomeHNH endonuclease1e-0651.6
NC_016631:2112175:213145121314512131828378Granulicella mallensis MP5ACTX8 chromosome, complete genomeHNH endonuclease3e-0650.8
NC_009656:5297000:530274053027405303138399Pseudomonas aeruginosa PA7 chromosome, complete genomeHNH endonuclease3e-0650.4
NC_002953:998944:100120210012021001522321Staphylococcus aureus subsp. aureus MSSA476, complete genomehypothetical protein9e-0648.9