Pre_GI: BLASTP Hits

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Query: NC_016944:1621575:1621575 Vibrio cholerae IEC224 chromosome I, complete sequence

Start: 1621575, End: 1622765, Length: 1191

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: It was isolated in November of 1994 at the city of Belém/Pa from a stool sample. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008825:564392:5770805770805782461167Methylibium petroleiphilum PM1, complete genomeputative major capsid protein6e-2099
NC_008751:1043269:1072159107215910733821224Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomephage major capsid protein, HK97 family3e-1686.7
NC_008340:682469:6949106949106960491140Alkalilimnicola ehrlichei MLHE-1, complete genomephage major capsid protein, HK97 family5e-1375.9
NC_011769:2016000:2031821203182120330411221Desulfovibrio vulgaris str. 'Miyazaki F', complete genomephage major capsid protein, HK97 family3e-1273.2
NC_007645:4651532:4675011467501146762041194Hahella chejuensis KCTC 2396, complete genomephage major capsid protein, HK97 family4e-1272.8
NC_008687:45967:5964459644608101167Paracoccus denitrificans PD1222 chromosome 2, complete sequencephage major capsid protein, HK97 family9e-1271.6
NC_010939:896500:9114889114889126751188Actinobacillus pleuropneumoniae serovar 7 str. AP76, completephage major capsid protein, HK97 family1e-1171.2
NC_016078:715005:7174747174747187001227Pelagibacterium halotolerans B2 chromosome, complete genomephage major capsid protein1e-1171.2
NC_013892:671000:6810956810956823061212Xenorhabdus bovienii SS-2004 chromosome, complete genomeSb64e-1169.3
NC_010086:810890:8344548344548357311278Burkholderia multivorans ATCC 17616 chromosome 2, completephage major capsid protein, HK97 family1e-1068.2
NC_014006:1204500:1215927121592712170391113Sphingobium japonicum UT26S chromosome 1, complete genomehypothetical protein4e-0963.2
NC_007650:1192310:1221666122166612229911326Burkholderia thailandensis E264 chromosome II, complete sequencephage major capsid protein, HK97 family4e-0962.8
NC_014640:4293430:4317555431755543187991245Achromobacter xylosoxidans A8 chromosome, complete genomephage major capsid protein, HK97 family9e-0961.6
NC_020911:2793234:2809398280939828105851188Octadecabacter antarcticus 307, complete genomeputative gene transfer agent major capsid protein2e-0860.5
NC_014034:1816000:1822519182251918237151197Rhodobacter capsulatus SB1003 chromosome, complete genomeHK97 family phage major capsid protein2e-0860.5
NC_014624:2944437:2944437294443729456391203Eubacterium limosum KIST612 chromosome, complete genomePhage major capsid protein7e-0858.5
NC_014624:1235818:1252840125284012540421203Eubacterium limosum KIST612 chromosome, complete genomephage major capsid protein7e-0858.5
NC_015593:203000:2142462142462153581113Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completephage major capsid protein HK97 family2e-0757
NC_014217:716500:7338287338287350961269Starkeya novella DSM 506 chromosome, complete genomephage major capsid protein, HK97 family3e-0653.1