Pre_GI: BLASTP Hits

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Query: NC_016842:1:24868 Treponema pallidum subsp. pertenue str. SamoaD chromosome, complete

Start: 24868, End: 24952, Length: 85

Host Lineage: Treponema pallidum; Treponema; Spirochaetaceae; Spirochaetales; Spirochaetes; Bacteria

General Information: This strain was isolated in Western Samoa in 1953. Treponema pallidum subsp. pertenue causes the chronic and disfiguring illness called yaws. The disease starts as a skin infection causing persistent ulcers and progresses to form tumor-like masses. This disease tends to infect children and is common in rural areas in Africa, Southeast Asia and equatorial South America.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_021508:12543:24863248632494785Treponema pallidum subsp. pallidum SS14, complete genometRNA-Ser2e-0857.8
NC_016848:12548:24868248682495285Treponema pallidum subsp. pertenue str. CDC2 chromosome, completetRNA-Ser2e-0857.8
NC_016844:12545:24865248652494985Treponema pallidum subsp. pallidum DAL-1 chromosome, completetRNA-Ser2e-0857.8
NC_016843:1:24868248682495285Treponema pallidum subsp. pertenue str. Gauthier chromosome,tRNA-Ser2e-0857.8
NC_000919:12545:24860248602494485Treponema pallidum subsp. pallidum str. Nichols, complete genometRNA-Ser2e-0857.8
NC_010741:12542:24857248572494185Treponema pallidum subsp. pallidum SS14, complete genometRNA-Ser2e-0857.8