Pre_GI: BLASTP Hits

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Query: NC_016842:1:22054 Treponema pallidum subsp. pertenue str. SamoaD chromosome, complete

Start: 22054, End: 24177, Length: 2124

Host Lineage: Treponema pallidum; Treponema; Spirochaetaceae; Spirochaetales; Spirochaetes; Bacteria

General Information: This strain was isolated in Western Samoa in 1953. Treponema pallidum subsp. pertenue causes the chronic and disfiguring illness called yaws. The disease starts as a skin infection causing persistent ulcers and progresses to form tumor-like masses. This disease tends to infect children and is common in rural areas in Africa, Southeast Asia and equatorial South America.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017268:1:2208822088241752088Treponema pallidum subsp. pallidum str. Chicago chromosome,01385
NC_021508:12543:2204922049241722124Treponema pallidum subsp. pallidum SS14, complete genomehypothetical protein01362
NC_016848:12548:2205422054241772124Treponema pallidum subsp. pertenue str. CDC2 chromosome, completehypothetical protein01362
NC_016844:12545:2205122051241742124Treponema pallidum subsp. pallidum DAL-1 chromosome, completehypothetical protein01362
NC_016843:1:2205422054241772124Treponema pallidum subsp. pertenue str. Gauthier chromosome,hypothetical protein01362
NC_010741:12542:2204322043241662124Treponema pallidum subsp. pallidum SS14, complete genomeprotein 76K01362
NC_000919:12545:2204622046241692124Treponema pallidum subsp. pallidum str. Nichols, complete genome76K protein01361