Pre_GI: BLASTP Hits

Some Help

Query: NC_016830:6589575:6604613 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 6604613, End: 6605572, Length: 960

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017986:5421000:5435429543542954372371809Pseudomonas putida ND6 chromosome, complete genomeintegral membrane sensor signal transduction histidine kinase2e-37156
NC_009512:3118907:3118907311890731207211815Pseudomonas putida F1, complete genomeintegral membrane sensor signal transduction histidine kinase2e-37156
NC_010571:3322467:3343870334387033482314362Opitutus terrae PB90-1, complete genomePAS/PAC sensor signal transduction histidine kinase1e-31137
NC_010571:3322467:3340109334010933438733765Opitutus terrae PB90-1, complete genomePAS/PAC sensor signal transduction histidine kinase1e-29130
NC_014623:1633889:1649426164942616506851260Stigmatella aurantiaca DW4/3-1 chromosome, complete genomesignal transduction histidine kinase-like protein9e-25114
NC_007645:4356865:4375157437515743771962040Hahella chejuensis KCTC 2396, complete genomeBacteriophytochrome (light-regulated signal transduction histidine kinase)2e-22107
NC_015730:1799500:1803644180364418048431200Roseobacter litoralis Och 149 chromosome, complete genomesensor transduction histidine kinase5e-1789
NC_013730:2403930:2407295240729524084581164Spirosoma linguale DSM 74, complete genomehistidine kinase4e-1065.9
NC_015064:3370840:3372880337288033742411362Acidobacterium sp. MP5ACTX9 chromosome, complete genomediguanylate cyclase3e-0652.8