Pre_GI: BLASTP Hits

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Query: NC_016830:6589575:6602247 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 6602247, End: 6602600, Length: 354

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009512:3118907:3118907311890731207211815Pseudomonas putida F1, complete genomeintegral membrane sensor signal transduction histidine kinase1e-2098.6
NC_017986:5421000:5435429543542954372371809Pseudomonas putida ND6 chromosome, complete genomeintegral membrane sensor signal transduction histidine kinase1e-2098.6
NC_010571:3322467:3340109334010933438733765Opitutus terrae PB90-1, complete genomePAS/PAC sensor signal transduction histidine kinase5e-1992.8
NC_010571:3322467:3343870334387033482314362Opitutus terrae PB90-1, complete genomePAS/PAC sensor signal transduction histidine kinase3e-1890.5
NC_014623:1633889:1649426164942616506851260Stigmatella aurantiaca DW4/3-1 chromosome, complete genomesignal transduction histidine kinase-like protein3e-1477.4
NC_012881:2405414:2410254241025424120081755Desulfovibrio salexigens DSM 2638, complete genomehistidine kinase6e-0752.8
NC_017249:8358438:8372414837241483748162403Bradyrhizobium japonicum USDA 6, complete genometwo component regulator1e-0651.6
NC_004463:1872537:1879666187966618823352670Bradyrhizobium japonicum USDA 110, complete genometwo component regulator1e-0651.6
NC_014217:1352777:1364021136402113662822262Starkeya novella DSM 506 chromosome, complete genomemulti-sensor signal transduction histidine kinase2e-0650.8
NC_015714:542679:5580945580945592841191Treponema paraluiscuniculi Cuniculi A chromosome, complete genomesensor histidine kinase4e-0650.4
NC_014623:6509000:6509043650904365103711329Stigmatella aurantiaca DW4/3-1 chromosome, complete genomesensor protein4e-0650.1
NC_008705:1557711:1569206156920615703901185Mycobacterium sp. KMS, complete genomeintegral membrane sensor signal transduction histidine kinase6e-0649.3
NC_017268:546376:561786561786562196411Treponema pallidum subsp. pallidum str. Chicago chromosome,7e-0649.3
NC_011757:39881:6236162361648742514Methylobacterium chloromethanicum CM4, complete genomemulti-sensor hybrid histidine kinase7e-0649.3