Pre_GI: BLASTP Hits

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Query: NC_016830:6499234:6513208 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 6513208, End: 6513603, Length: 396

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015572:4618467:464046346404634640858396Methylomonas methanica MC09 chromosome, complete genomeDNA polymerase beta domain-containing protein8e-44175
NC_016023:1769925:180213718021371802532396Bacillus coagulans 36D1 chromosome, complete genomeDNA polymerase beta domain-containing protein region4e-1476.6
NC_010831:2078329:211752621175262117921396Chlorobium phaeobacteroides BS1, complete genomeDNA polymerase beta domain protein region1e-1272
NC_012918:1444333:146123214612321461642411Geobacter sp. M21 chromosome, complete genomeDNA polymerase beta domain-containing protein region1e-1272
NC_015589:1240197:126462612646261265021396Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeDNA polymerase beta domain-containing protein3e-1270.9
NC_007103:230872:268489268489268896408Bacillus cereus E33L plasmid pE33L466, complete sequencepossible nucleotidyltransferase4e-1270.1
NC_011146:3426500:344604034460403446693654Geobacter bemidjiensis Bem, complete genomeDNA polymerase beta domain protein region2e-1168.2
NC_015565:1920329:192311519231151923519405Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeDNA polymerase beta domain-containing protein region2e-1167.4
NC_010524:2530841:253084125308412531227387Leptothrix cholodnii SP-6, complete genomeDNA polymerase, beta domain protein region1e-0858.5
NC_007512:2024880:202813720281372028538402Pelodictyon luteolum DSM 273, complete genomehypothetical protein2e-0857.8
NC_021184:549940:554424554424554834411Desulfotomaculum gibsoniae DSM 7213, complete genomeputative nucleotidyltransferase4e-0856.6
NC_013173:3679326:368467236846723685070399Desulfomicrobium baculatum DSM 4028, complete genomeDNA polymerase beta domain protein region2e-0754.7
NC_008340:277223:285166285166285579414Alkalilimnicola ehrlichei MLHE-1, complete genomeDNA polymerase, beta domain protein region2e-0754.7
NC_008789:835909:838797838797839168372Halorhodospira halophila SL1, complete genomeDNA polymerase, beta domain protein region5e-0753.1
NC_010803:1573849:157777715777771578196420Chlorobium limicola DSM 245, complete genomeDNA polymerase beta domain protein region1e-0652
NC_014394:1373602:137727313772731377686414Gallionella capsiferriformans ES-2 chromosome, complete genomeDNA polymerase beta domain-containing protein region1e-0652
NC_009033:755226:757817757817758248432Staphylothermus marinus F1, complete genomeDNA polymerase, beta domain protein region2e-0651.2