Pre_GI: BLASTP Hits

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Query: NC_016830:5109953:5116338 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 5116338, End: 5116613, Length: 276

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010676:304405:325754325754326458705Burkholderia phytofirmans PsJN chromosome 2, complete sequencetranscriptional regulator, LuxR family1e-1479
NC_014394:1594071:159742715974271598158732Gallionella capsiferriformans ES-2 chromosome, complete genometranscriptional regulator, LuxR family3e-1373.9
NC_015566:2125403:213303321330332133737705Serratia sp. AS12 chromosome, complete genomeregulatory protein LuxR1e-1168.6
NC_015567:2125415:213304521330452133749705Serratia sp. AS9 chromosome, complete genomeregulatory protein LuxR1e-1168.6
NC_020453:1025891:102750510275051028296792Agromonas oligotrophica S58 DNA, complete genomehypothetical protein2e-0961.2
NC_015259:485015:532878532878533531654Polymorphum gilvum SL003B-26A1 chromosome, complete genomeLuxR family transcriptional regulator2e-0960.8
NC_010682:460523:492274492274493035762Ralstonia pickettii 12J chromosome 1, complete sequencetranscriptional regulator, LuxR family1e-0858.2
NC_015259:734795:739811739811740503693Polymorphum gilvum SL003B-26A1 chromosome, complete genomePutative N-acyl homoserine lactone transcriptional regulator, LuxR-like protein3e-0857
NC_012856:2633890:265554826555482656153606Ralstonia pickettii 12D chromosome 1, complete genometwo component transcriptional regulator, LuxR family5e-0856.6
NC_010682:3033646:306006730600673060672606Ralstonia pickettii 12J chromosome 1, complete sequencetwo component transcriptional regulator, LuxR family7e-0855.8
NC_017249:8221992:822574082257408226213474Bradyrhizobium japonicum USDA 6, complete genometranscriptional regulator1e-0755.5
NC_004463:1992000:203431920343192035080762Bradyrhizobium japonicum USDA 110, complete genometranscriptional regulatory protein1e-0755.5
NC_015554:4648919:465227746522774653170894Alteromonas sp. SN2 chromosome, complete genometwo-component response regulator2e-0754.7
NC_008391:2045348:205893020589302059619690Burkholderia cepacia AMMD chromosome 2, complete sequencetranscriptional regulator, LuxR family2e-0754.7
NC_015637:325561:342547342547343269723Vibrio anguillarum 775 chromosome chromosome II, complete sequenceLuxR family transcriptional regulator2e-0754.3
NC_010505:4990472:501816850181685018758591Methylobacterium radiotolerans JCM 2831, complete genometwo component transcriptional regulator, LuxR family2e-0754.3
NC_011001:2085986:208673720867372087456720Burkholderia cenocepacia J2315 chromosome 2, complete sequenceN-acylhomoserine lactone dependent regulatory protein CepR3e-0753.9
NC_010515:2691000:271900327190032719722720Burkholderia cenocepacia MC0-3 chromosome 2, complete sequencetranscriptional regulator, LuxR family3e-0753.9
NC_007511:1147696:117772911777291178448720Burkholderia sp. 383 chromosome 2, complete sequencetranscriptional regulator, LuxR family4e-0753.5
NC_016514:2950860:295410229541022954824723Enterobacter cloacae EcWSU1 chromosome, complete genomeregulatory protein SdiA5e-0753.1
NC_010506:2441944:244888424488842449501618Shewanella woodyi ATCC 51908, complete genomeATP-dependent transcriptional regulator, MalT-like, LuxR family7e-0752.8
NC_009436:2685910:270101327010132701735723Enterobacter sp. 638, complete genomeDNA-binding transcriptional activator SdiA7e-0752.8
NC_011979:2641500:265821026582102658956747Geobacter sp. FRC-32, complete genometranscriptional regulator, LuxR family1e-0652
NC_007645:1443296:1443843144384314465512709Hahella chejuensis KCTC 2396, complete genomeATP-dependent transcriptional regulator1e-0651.6
NC_010611:154307:155484155484156200717Acinetobacter baumannii ACICU, complete genomeDNA-binding HTH domain-containing protein2e-0651.2
NC_010410:3777076:379324937932493793965717Acinetobacter baumannii AYE, complete genomeputative Autoinducer-binding transcriptional regulator (LuxR family)2e-0651.2
NC_011586:164746:165921165921166637717Acinetobacter baumannii AB0057 chromosome, complete genomeeR transcriptional regulator2e-0651.2
NC_011595:3607402:362357536235753624291717Acinetobacter baumannii AB307-0294, complete genometranscriptional activator protein phzR2e-0651.2
NC_017171:155836:157012157012157728717Acinetobacter baumannii MDR-ZJ06 chromosome, complete genomeautoinducer-binding transcriptional regulator2e-0651.2
NC_017387:147906:149082149082149798717Acinetobacter baumannii TCDC-AB0715 chromosome, complete genomeautoinducer-binding transcriptional regulator2e-0651.2
NC_009085:131000:132302132302132898597Acinetobacter baumannii ATCC 17978, complete genomeeR transcriptional regulator2e-0651.2
NC_016603:3259432:326063032606303261346717Acinetobacter calcoaceticus PHEA-2 chromosome, complete genometranscriptional activator of quorum sensing autoinducer synthesis transcription regulator protein3e-0650.8
NC_014259:3984568:400097840009784001694717Acinetobacter sp. DR1 chromosome, complete genomeTranscriptional activator protein phzR4e-0650.1