Pre_GI: BLASTP Hits

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Query: NC_016830:4999946:4999946 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 4999946, End: 5001091, Length: 1146

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_021150:2348214:2380300238030023813641065Azotobacter vinelandii CA6, complete genomeMFS metabolite transporter2e-110399
NC_012560:2348202:2380288238028823813521065Azotobacter vinelandii DJ, complete genomeMFS metabolite transporter2e-110399
NC_013851:2441407:2441407244140724425491143Allochromatium vinosum DSM 180 chromosome, complete genomemajor facilitator superfamily MFS_17e-59228
NC_014394:522000:5333825333825345451164Gallionella capsiferriformans ES-2 chromosome, complete genomemajor facilitator superfamily MFS_11e-48194
NC_008345:3199965:3201469320146932026411173Shewanella frigidimarina NCIMB 400, complete genomemajor facilitator superfamily MFS_13e-45182
NC_008322:1708631:1725665172566517268341170Shewanella sp. MR-7, complete genomemajor facilitator superfamily MFS_14e-43176
NC_008321:1636148:1654302165430216554711170Shewanella sp. MR-4, complete genomemajor facilitator superfamily MFS_12e-43176
NC_010334:3224009:3224009322400932251631155Shewanella halifaxensis HAW-EB4, complete genomemajor facilitator superfamily MFS_16e-43175
NC_008577:1690946:1708987170898717101561170Shewanella sp. ANA-3 chromosome 1, complete sequencemajor facilitator superfamily MFS_17e-43174
NC_004347:3197219:3197219319721931983881170Shewanella oneidensis MR-1, complete genomemajor facilitator family protein, putative1e-42174
NC_008702:1094663:1114958111495811161481191Azoarcus sp. BH72, complete genomeputative MFS metabolite transporter3e-42172
NC_009901:3148901:3150053315005331512161164Shewanella pealeana ATCC 700345, complete genomemajor facilitator superfamily MFS_13e-42172
NC_009052:3229775:3229775322977532309501176Shewanella baltica OS155, complete genomemajor facilitator superfamily MFS_16e-40165
NC_011663:1867000:1883101188310118842761176Shewanella baltica OS223 chromosome, complete genomemajor facilitator superfamily protein6e-40165
NC_009092:2833865:2835052283505228362601209Shewanella loihica PV-4, complete genomemajor facilitator superfamily MFS_13e-39162
NC_008700:2607526:2607526260752626086951170Shewanella amazonensis SB2B, complete genomemajor facilitator superfamily MFS_19e-39161
NC_011312:3060371:3067539306753930687201182Aliivibrio salmonicida LFI1238 chromosome chromosome 1, complete3-phenylpropionic acid transporter2e-22107
NC_011753:3088952:3096297309629730974931197Vibrio splendidus LGP32 chromosome 1, complete genomeputative transport permease protein3e-20100
NC_011740:621408:6350626350626362011140Escherichia fergusonii ATCC 35469, complete genomeputative 3-phenylpropionic transporter3e-2099.8
NC_015958:2527376:2546563254656325477291167Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomemajor facilitator superfamily protein9e-1375.1
NC_014166:3072703:3093427309342730945151089Arcobacter nitrofigilis DSM 7299 chromosome, complete genomemajor facilitator superfamily protein8e-1065.1
NC_009662:1849239:1867222186722218683341113Nitratiruptor sp. SB155-2, complete genomenucleoside:H+ symporter7e-0962
NC_016641:3711972:3725236372523637264471212Paenibacillus terrae HPL-003 chromosome, complete genomemaltose permease4e-0652.8