Pre_GI: BLASTP Hits

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Query: NC_016830:4914406:4917953 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 4917953, End: 4918483, Length: 531

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015379:5002595:500614450061445006674531Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Hypothetical protein; putative membrane protein2e-59228
NC_010334:2749250:276738727673872767953567Shewanella halifaxensis HAW-EB4, complete genomepeptidase A24A prepilin type IV1e-0755.8
NC_009831:2884851:288852628885262889101576Shewanella sediminis HAW-EB3, complete genomehypothetical protein1e-0653.1
NC_016002:2453919:248584724858472486371525Pseudogulbenkiania sp. NH8B, complete genomepeptidase A24A prepilin type IV2e-0652
NC_013223:1349000:137549413754941376063570Desulfohalobium retbaense DSM 5692, complete genomepeptidase A24A prepilin type IV3e-0651.6