Pre_GI: BLASTP Hits

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Query: NC_016830:4809210:4812515 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 4812515, End: 4813612, Length: 1098

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015733:1976752:1991365199136519924021038Pseudomonas putida S16 chromosome, complete genomesterol desaturase1e-167588
NC_019940:929071:933337933337934113777Thioflavicoccus mobilis 8321 chromosome, complete genomesterol desaturase5e-1375.5
NC_011001:163813:186525186525187442918Burkholderia cenocepacia J2315 chromosome 2, complete sequencehypothetical protein2e-1273.9
NC_014120:88679:898738987390727855Burkholderia sp. CCGE1002 plasmid pBC201, complete sequencefatty acid hydroxylase2e-1170.1
NC_016745:1472000:148880014888001489609810Oceanimonas sp. GK1 chromosome, complete genomesterol desaturase3e-1170.1
NC_016112:2903767:291457029145702915568999Methylomicrobium alcaliphilum chromosome, complete genomeFatty acid hydroxylase9e-1168.2
NC_007511:3371319:3371319337131933723381020Burkholderia sp. 383 chromosome 2, complete sequenceSterol desaturase-like1e-1067.8
NC_011138:3182807:319177131917713192574804Alteromonas macleodii 'Deep ecotype', complete genomesterol desaturase-related protein2e-1067
NC_003296:903947:9155199155199166761158Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePROBABLE TRANSMEMBRANE PROTEIN6e-1065.5
NC_008596:2873675:287456428745642875436873Mycobacterium smegmatis str. MC2 155, complete genomeC-5 sterol desaturase7e-1065.1
NC_010627:532407:544175544175545029855Burkholderia phymatum STM815 plasmid pBPHY02, complete sequencefatty acid hydroxylase1e-0860.8
NC_013960:452493:461392461392462267876Nitrosococcus halophilus Nc4 chromosome, complete genomefatty acid hydroxylase8e-0858.5
NC_015563:4911188:4925672492567249267961125Delftia sp. Cs1-4 chromosome, complete genomefatty acid hydroxylase1e-0758.2
NC_010002:2518599:2524226252422625253501125Delftia acidovorans SPH-1, complete genomefatty acid hydroxylase1e-0757.8
NC_013960:1693643:169871216987121699572861Nitrosococcus halophilus Nc4 chromosome, complete genomefatty acid hydroxylase1e-0757.8
NC_008347:2515921:252802925280292528883855Maricaulis maris MCS10, complete genomehypothetical protein4e-0652.8
NC_015186:2197236:226819622681962269035840Acidiphilium multivorum AIU301, complete genomehypothetical protein5e-0652.4