Pre_GI: BLASTP Hits

Some Help

Query: NC_016830:4639388:4656146 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 4656146, End: 4656628, Length: 483

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004129:2201780:220428922042892204771483Pseudomonas fluorescens Pf-5, complete genomeanti-sigma factor antagonist8e-82301
NC_020209:945000:949629949629950111483Pseudomonas poae RE*1-1-14, complete genomeanti-anti-sigma factor2e-81300
NC_010501:1868888:187012318701231870605483Pseudomonas putida W619, complete genomeanti-sigma-factor antagonist2e-77287
NC_008027:3953951:397283339728333973315483Pseudomonas entomophila L48, complete genomeanti-anti-sigma factor3e-76283
NC_010611:679862:683767683767684348582Acinetobacter baumannii ACICU, complete genomeAnti-anti-sigma regulatory factor (antagonist of anti-sigma factor)2e-24111
NC_010410:3166279:318014931801493180730582Acinetobacter baumannii AYE, complete genomehypothetical protein4e-24110