Pre_GI: BLASTP Hits

Some Help

Query: NC_016830:3869572:3941874 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 3941874, End: 3942548, Length: 675

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015733:2658337:266966726696672670200534Pseudomonas putida S16 chromosome, complete genomeTetR family transcriptional regulator4e-1168.2
NC_008699:833737:853126853126853728603Nocardioides sp. JS614, complete genomeregulatory protein, TetR8e-0960.5
NC_017187:750363:763636763636764229594Arcobacter butzleri ED-1, complete genomeTetR family transcriptional regulator1e-0757
NC_015638:1824794:182757218275721828141570Lacinutrix sp. 5H-3-7-4 chromosome, complete genomeTetR family transcriptional regulator2e-0755.8
NC_013385:1064188:107194410719441072534591Ammonifex degensii KC4, complete genometranscriptional regulator, TetR family1e-0653.5
NC_014915:3320768:336686733668673367790924Geobacillus sp. Y412MC52 chromosome, complete genomeregulatory protein TetR2e-0653.1
NC_011000:1262324:126468212646821265407726Burkholderia cenocepacia J2315 chromosome 1, complete sequenceTetR family regulatory protein2e-0652.8
NC_006361:498305:504157504157504795639Nocardia farcinica IFM 10152, complete genomeputative transcriptional regulator3e-0652.4
NC_016147:1788219:180650518065051807080576Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeTetR family transcriptional regulator6e-0650.8
NC_015953:3159234:316659831665983167191594Streptomyces sp. SirexAA-E chromosome, complete genomeTetR family transcriptional regulator9e-0650.4