Pre_GI: BLASTP Hits

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Query: NC_016830:3869572:3931577 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 3931577, End: 3931834, Length: 258

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007651:3064530:314061031406103140957348Burkholderia thailandensis E264 chromosome I, complete sequenceHelix-turn-helix domain protein, putative5e-1889.7
NC_012968:239476:241214241214241558345Methylotenera mobilis JLW8, complete genometranscriptional regulator, XRE family2e-1684.3
NC_009512:3282500:330922433092243309568345Pseudomonas putida F1, complete genometranscriptional regulator, XRE family4e-1683.2
NC_011000:1262324:130345613034561303824369Burkholderia cenocepacia J2315 chromosome 1, complete sequenceputative DNA-binding protein6e-1682.8
NC_016002:2946702:296578929657892966139351Pseudogulbenkiania sp. NH8B, complete genomehelix-turn-helix domain containing protein1e-1581.6
NC_005085:1269787:127673512767351277082348Chromobacterium violaceum ATCC 12472, complete genomehypothetical protein2e-1477.4
NC_012691:2476223:250564725056472505994348Tolumonas auensis DSM 9187, complete genometranscriptional regulator, XRE family4e-1476.6
NC_015424:3520783:352380635238063524156351Aeromonas veronii B565 chromosome, complete genomeHelix-turn-helix domain-containing protein4e-1476.6
NC_008570:1143578:118341811834181183768351Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomehelix-turn-helix domain protein4e-1476.6
NC_014910:3727887:374055337405533740909357Alicycliphilus denitrificans BC chromosome, complete genomehelix-turn-helix domain protein1e-1168.6
NC_015422:3581848:358870835887083589061354Alicycliphilus denitrificans K601 chromosome, complete genomehelix-turn-helix domain-containing protein6e-1166.2
NC_008542:1021848:103003110300311030429399Burkholderia cenocepacia HI2424 chromosome 1, complete sequencetranscriptional regulator, XRE family2e-1064.7
NC_008060:476861:485382485382485657276Burkholderia cenocepacia AU 1054 chromosome 1, complete sequencehypothetical protein8e-1062.4
NC_012724:2611000:261794626179462618323378Burkholderia glumae BGR1 chromosome 1, complete genomehypothetical protein2e-0960.8
NC_014394:1594071:160903816090381609412375Gallionella capsiferriformans ES-2 chromosome, complete genomehelix-turn-helix domain-containing protein2e-0857.8
NC_012856:2815797:284609528460952846448354Ralstonia pickettii 12D chromosome 1, complete genometranscriptional regulator, XRE family8e-0855.8
NC_016002:1:141721417214573402Pseudogulbenkiania sp. NH8B, complete genomeXRE family transcriptional regulator5e-0649.7