Pre_GI: BLASTP Hits

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Query: NC_016830:3869572:3904883 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 3904883, End: 3906370, Length: 1488

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017068:1480148:1482222148222214834211200Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative sodium/sulfate symporter2e-101369
NC_011999:198769:1987691987692002381470Macrococcus caseolyticus JCSC5402, complete genomeanion transporter family protein homolog2e-93343
NC_016584:1998000:2016301201630120177131413Desulfosporosinus orientis DSM 765 chromosome, complete genomeanion transporter5e-26119
NC_008268:3162824:3182291318229131838981608Rhodococcus sp. RHA1, complete genomesodium symporter, ABC superfamily2e-24114
NC_009454:1577319:1605519160551916069491431Pelotomaculum thermopropionicum SI, complete genomedi- and tricarboxylate transporters3e-23110
NC_017068:2569609:2569609256960925711531545Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative sodium-dependent dicarboxylate transporter1e-22108
NC_015589:814530:8365698365698380771509Desulfotomaculum ruminis DSM 2154 chromosome, complete genomesodium/sulfate symporter3e-22106
NC_015216:328598:3459073459073473041398Methanobacterium sp. AL-21 chromosome, complete genomeanion transporter1e-21104
NC_006138:857692:8633748633748652541881Desulfotalea psychrophila LSv54, complete genomesimilar to Na/dicarboxylate cotransporter4e-2099.8
NC_014831:2224733:2239157223915722405991443Thermaerobacter marianensis DSM 12885 chromosome, complete genomeanion transporter5e-2099.8
NC_009092:2902171:2929103292910329304941392Shewanella loihica PV-4, complete genomeanion transporter6e-2099.4
NC_009454:1577319:1612997161299716144271431Pelotomaculum thermopropionicum SI, complete genomedi- and tricarboxylate transporters3e-1996.7
NC_015565:1281397:1291717129171712931681452Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeanion transporter4e-1996.7
NC_007644:362000:3877203877203891321413Moorella thermoacetica ATCC 39073, complete genomeanion transporter9e-1892
NC_018524:2423016:2442893244289324444581566Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomeNa+ symporter family protein1e-1688.6
NC_009707:36024:5459854598559651368Campylobacter jejuni subsp. doylei 269.97 chromosome, completeCitT protein5e-1686.3
NC_013508:275081:2827312827312841851455Edwardsiella tarda EIB202, complete genomeputative tartrate:succinate antiporter8e-1685.5
NC_012779:261438:2675182675182689721455Edwardsiella ictaluri 93-146, complete genomeinner membrane protein YbhI2e-1584.7
NC_013941:975353:9753539753539767861434Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeAnion transporter2e-1584.3
NC_010519:71365:9273592735941231389Haemophilus somnus 2336 chromosome, complete genomeanion transporter2e-1584
NC_008309:190550:2195322195322209201389Haemophilus somnus 129PT, complete genomeconserved transporter, NadC family2e-1584
NC_014335:2009662:2030323203032320317531431Bacillus cereus biovar anthracis str. CI chromosome, completesodium/solute symporter family protein4e-1583.2
NC_015563:6167512:6169931616993161714361506Delftia sp. Cs1-4 chromosome, complete genomeanion transporter9e-1582
NC_010002:1145951:1159996115999611615011506Delftia acidovorans SPH-1, complete genomeanion transporter9e-1582
NC_012472:2109719:2130993213099321324231431Bacillus cereus 03BB102, complete genomesodium/solute symporter family protein1e-1481.3
NC_018524:2423016:2441234244123424427991566Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomeNa+ symporter family protein5e-1479.3
NC_011283:4767269:4778706477870647801391434Klebsiella pneumoniae 342 chromosome, complete genometransporter divalent anion:Na+ symporter (DASS) family1e-1274.7
NC_013850:4612812:4624249462424946256821434Klebsiella variicola At-22 chromosome, complete genomeanion transporter1e-1274.7
NC_013523:959625:9596259596259612171593Sphaerobacter thermophilus DSM 20745 chromosome 1, complete genomeanion transporter2e-1274.3
NC_010617:774914:8161948161948176241431Kocuria rhizophila DC2201, complete genomeDASS family transporter2e-1274.3
NC_014215:2295500:2310271231027123117791509Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,malate transporter yflS2e-1273.9
NC_015224:1914833:1917869191786919193321464Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,citrate carrier5e-1272.8
NC_016782:152764:1570571570571586311575Corynebacterium diphtheriae 241 chromosome, complete genomehypothetical protein7e-1272.4
NC_016800:163436:1677651677651693391575Corynebacterium diphtheriae BH8 chromosome, complete genomehypothetical protein7e-1272.4
NC_016799:167362:1726521726521742261575Corynebacterium diphtheriae 31A chromosome, complete genomehypothetical protein7e-1272.4
NC_016599:513357:5311825311825325971416Owenweeksia hongkongensis DSM 17368 chromosome, complete genomeanion transporter9e-1272
NC_013520:1638000:1662317166231716637201404Veillonella parvula DSM 2008, complete genomeanion transporter2e-1171.2
NC_012590:2501593:2510444251044425119431500Corynebacterium aurimucosum ATCC 700975, complete genomeanion transporter2e-1170.9
NC_016787:135677:1447671447671463411575Corynebacterium diphtheriae HC03 chromosome, complete genomehypothetical protein7e-1169.3
NC_009663:982048:9951689951689965831416Sulfurovum sp. NBC37-1, complete genomeoxoglutarate:malate translocator8e-1168.9
NC_004461:245768:2504372504372518551419Staphylococcus epidermidis ATCC 12228, complete genome2-oxoglutarate/malate translocator-like protein2e-1067.4
NC_014634:28690:3242532425338461422Ilyobacter polytropus DSM 2926 plasmid pILYOP02, complete sequenceanion transporter1e-0965.5
NC_017068:1327025:133427213342721334496225Selenomonas ruminantium subsp. lactilytica TAM6421, completehypothetical protein1e-0965.1
NC_009850:2169459:2184155218415521855611407Arcobacter butzleri RM4018, complete genomesodium:sulfate symporter family protein1e-0965.1
NC_006322:741516:7686787686787701021425Bacillus licheniformis ATCC 14580, complete genomehypothetical protein3e-0963.5
NC_015387:1803938:1837125183712518385551431Marinithermus hydrothermalis DSM 14884 chromosome, complete genomeanion transporter3e-0860.5
NC_015873:790961:7975897975897990011413Megasphaera elsdenii DSM 20460, complete genomehypothetical protein5e-0859.7
NC_014328:3120145:3120775312077531222231449Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative sodium:sulfate symporter7e-0859.3
NC_015738:1925997:1929984192998419313811398Eggerthella sp. YY7918, complete genomehypothetical protein2e-0757.4
NC_002953:2773000:2781645278164527830631419Staphylococcus aureus subsp. aureus MSSA476, complete genomesodium:sulfate symporter family protein2e-0757.4
NC_003923:2794686:2802305280230528037231419Staphylococcus aureus subsp. aureus MW2, complete genomehypothetical protein2e-0757.4
NC_008536:5192235:5193891519389151952641374Solibacter usitatus Ellin6076, complete genomeanion transporter2e-0757.4
NC_012214:2221702:2270296227029622718071512Erwinia pyrifoliae Ep1/96, complete genomePutative tartrate carrier (Tartrate transporter) (Tartrate/succinate antiporter), YgjE4e-0756.6
NC_013887:1462918:1480370148037014816681299Methanocaldococcus sp. FS406-22 chromosome, complete genomeanion transporter5e-0756.2
NC_009663:982048:9937359937359950811347Sulfurovum sp. NBC37-1, complete genomesodium:sulphate symporter8e-0755.8
NC_010694:2138000:2181442218144221828781437Erwinia tasmaniensis, complete genomePutative tartrate carrier (Tartrate transporter) (Tartrate/succinate antiporter)6e-0755.8
NC_014541:1231021:1234607123460712359981392Ferrimonas balearica DSM 9799 chromosome, complete genomeanion transporter1e-0655.1
NC_009655:195500:2166372166372180941458Actinobacillus succinogenes 130Z chromosome, complete genomeanion transporter1e-0655.1
NC_015172:1120000:1127079112707911284911413Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomesodium/sulphate symporter3e-0653.9
NC_019962:1909103:1909863190986319113441482Natrinema pellirubrum DSM 15624, complete genomedi-/tricarboxylate transporter4e-0653.5
NC_015740:2614317:2616696261669626181441449Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completedi- and tricarboxylate transporter5e-0653.1