Pre_GI: BLASTP Hits

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Query: NC_016830:3697173:3742248 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 3742248, End: 3742856, Length: 609

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009654:3316458:333297633329763333587612Marinomonas sp. MWYL1, complete genomelysine exporter protein LysE/YggA8e-36149
NC_012559:978419:993730993730994341612Laribacter hongkongensis HLHK9, complete genomeProbable transporter, LysE family protein1e-30132
NC_012997:4152938:416157541615754162186612Teredinibacter turnerae T7901, complete genometranslocator protein, LysE family6e-1787.4
NC_014217:2172464:218715121871512187774624Starkeya novella DSM 506 chromosome, complete genomeLysine exporter protein (LYSE/YGGA)2e-1169.3
NC_008570:236500:254484254484255104621Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomelysine exporter protein, putative5e-1167.8
NC_020210:661236:665046665046665687642Geobacillus sp. GHH01, complete genomeamino acid transporter1e-0963.2
NC_016593:762216:782155782155782796642Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completehomoserine/homoserine lactone efflux transporter (RhtB family)2e-0962.4
NC_007005:98488:101677101677102312636Pseudomonas syringae pv. syringae B728a, complete genomeLysine exporter protein (LYSE/YGGA)2e-0962.4
NC_015856:3675592:369652336965233697329807Collimonas fungivorans Ter331 chromosome, complete genomeLysE family transporter5e-0960.8
NC_012997:4152938:416505841650584165681624Teredinibacter turnerae T7901, complete genometranslocator protein, LysE family1e-0860.1
NC_012997:4152938:416375341637534164373621Teredinibacter turnerae T7901, complete genometranslocator protein, LysE family6e-0857.4
NC_012856:207194:209129209129209770642Ralstonia pickettii 12D chromosome 1, complete genomeLysine exporter protein (LYSE/YGGA)2e-0756.2
NC_014532:1481787:150940215094021510139738Halomonas elongata DSM 2581, complete genomelysine exporter protein (LysE/YggA)5e-0651.2