Pre_GI: BLASTP Hits

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Query: NC_016830:3230939:3242912 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 3242912, End: 3243076, Length: 165

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015379:3736500:375006737500673750504438Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative Transcription factor, AsnC family6e-25112
NC_015379:6023926:604306160430616043498438Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative transcriptional regulator, AsnC family1e-1582
NC_009512:755658:782286782286782723438Pseudomonas putida F1, complete genomeputative transcriptional regulator, AsnC family4e-1373.6
NC_012660:2143376:217899321789932179430438Pseudomonas fluorescens SBW25 chromosome, complete genomeputative AsnC family regulatory protein6e-1372.8