Pre_GI: BLASTP Hits

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Query: NC_016830:2642881:2665349 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 2665349, End: 2667097, Length: 1749

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015379:4249238:4249238424923842508781641Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative ABC transporter, permease component0952
NC_009485:7827782:7836417783641778381741758Bradyrhizobium sp. BTAi1 chromosome, complete genomeABC transporter permease0672
NC_016816:3917446:3923316392331639250521737Pantoea ananatis LMG 5342, complete genomenitrate/sulfonate/bicarbonate ABC transporter inner membrane permease protein6e-161567
NC_013956:663295:6753926753926771281737Pantoea ananatis LMG 20103 chromosome, complete genomeProW9e-160563
NC_011146:482440:5094685094685112041737Geobacter bemidjiensis Bem, complete genomebinding-protein-dependent transport systems inner membrane component2e-146520
NC_014974:1076565:1076565107656510782381674Thermus scotoductus SA-01 chromosome, complete genomeABC transporter permease3e-117422
NC_004668:1010610:1025795102579510275521758Enterococcus faecalis V583, complete genomeABC transporter, permease protein2e-80300
NC_015757:4680:2773427734287741041Sulfobacillus acidophilus TPY chromosome, complete genomebinding-protein-dependent transport systems inner membrane component1e-43178
NC_010677:1784000:178441117844111785148738Francisella tularensis subsp. mediasiatica FSC147, complete genome3e-32140
NC_012588:211633:2219412219412235481608Sulfolobus islandicus M.14.25 chromosome, complete genomebinding-protein-dependent transport system inner membrane protein3e-24114
NC_014471:135919:158406158406159080675Ignisphaera aggregans DSM 17230 chromosome, complete genomebinding-protein-dependent transport systems inner membrane component9e-1892.4
NC_011766:1106739:1115599111559911170921494Desulfurococcus kamchatkensis 1221n chromosome, complete genomebinding-protein-dependent transport systems inner membrane component4e-1790.1
NC_019745:3778017:379342137934213794260840Gloeocapsa sp. PCC 7428, complete genomenitrate ABC transporter, inner membrane subunit5e-1066.6
NC_010474:19256:206672066721506840Synechococcus sp. PCC 7002 plasmid pAQ7, complete sequenceABC-type nitrate/sulfonate/bicarbonate transport system, permease3e-0757.4
NC_013859:421500:4420984420984431801083Azospirillum sp. B510 plasmid pAB510e, complete sequencesulfonate/nitrate/taurine transport system permease protein8e-0652.4