Pre_GI: BLASTP Hits

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Query: NC_016830:2247789:2268820 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 2268820, End: 2269284, Length: 465

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011145:4365730:437137943713794372005627Anaeromyxobacter sp. K, complete genomeregulatory protein TetR7e-1166.2
NC_012491:4231469:425141842514184251933516Brevibacillus brevis NBRC 100599, complete genomeprobable transcriptional regulator5e-0856.6
NC_007802:1240989:125796812579681258576609Jannaschia sp. CCS1, complete genometranscriptional regulator, TetR family6e-0856.6
NC_008595:5234467:525148652514865252076591Mycobacterium avium 104, complete genomeputative transcriptional regulator8e-0856.2
NC_010581:3387118:338925733892573389799543Beijerinckia indica subsp. indica ATCC 9039, complete genometranscriptional regulator, TetR family2e-0651.2