Pre_GI: BLASTP Hits

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Query: NC_016830:1645879:1662965 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 1662965, End: 1663333, Length: 369

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013850:3340882:336841233684123368774363Klebsiella variicola At-22 chromosome, complete genomeCupin 2 conserved barrel domain protein3e-43173
NC_020260:2725201:273290427329042733266363Cronobacter sakazakii Sp291, complete genomecupin domain-containing protein2e-42170
NC_009725:496443:534212534212534574363Bacillus amyloliquefaciens FZB42, complete genomehypothetical protein2e-40164
NC_020410:495184:518315518315518680366Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeMannose-6-phosphate isomerase5e-40162
NC_019842:484933:525939525939526304366Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,hypothetical protein1e-39161
NC_007348:2519447:253645425364542536879426Ralstonia eutropha JMP134 chromosome 2, complete sequenceCupin region1e-36151
NC_012483:3000619:300137030013703001738369Acidobacterium capsulatum ATCC 51196, complete genomecupin domain protein1e-35148
NC_016048:2907702:294119729411972941556360Oscillibacter valericigenes Sjm18-20, complete genomehypothetical protein3e-25113
NC_011283:1178500:118314011831401183502363Klebsiella pneumoniae 342 chromosome, complete genomecupin domain-containing protein3e-23106
NC_015638:877233:885926885926886291366Lacinutrix sp. 5H-3-7-4 chromosome, complete genomeCupin 2 barrel domain-containing protein4e-21100
NC_003047:74986:942149421494570357Sinorhizobium meliloti 1021, complete genomehypothetical protein1e-1995.1
NC_013131:7437831:744677574467757447176402Catenulispora acidiphila DSM 44928, complete genomecyclic nucleotide-binding protein2e-1890.9
NC_020911:2998000:3014086301408630151441059Octadecabacter antarcticus 307, complete genomeputative triosephosphate isomerase (TIM)5e-1683.2
NC_014834:959986:963852963852964271420Rhodopseudomonas palustris DX-1 chromosome, complete genomecupin2e-0961.2
NC_014551:442135:457288457288457629342Bacillus amyloliquefaciens DSM 7, complete genomehypothetical protein5e-0959.7
NC_017191:425000:440722440722441063342Bacillus amyloliquefaciens XH7 chromosome, complete genomehypothetical protein5e-0959.7
NC_017190:424000:439425439425439766342Bacillus amyloliquefaciens LL3 chromosome, complete genomehypothetical protein5e-0959.7
NC_017188:419000:434692434692435033342Bacillus amyloliquefaciens TA208 chromosome, complete genomehypothetical protein5e-0959.7