Pre_GI: BLASTP Hits

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Query: NC_016582:7101701:7109003 Streptomyces bingchenggensis BCW-1 chromosome, complete genome

Start: 7109003, End: 7110361, Length: 1359

Host Lineage: Streptomyces bingchenggensis; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Streptomyces bingchenggensis BCW-1 was isolated from a soil sample collected in Harbin, China. This species produces milbemycins, a family of macrocyclic lactones widely used in human health, animal health, and crop protection. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016109:4581467:4589862458986245912501389Kitasatospora setae KM-6054, complete genomehypothetical protein3e-132472
NC_015953:1860946:1865228186522818663761149Streptomyces sp. SirexAA-E chromosome, complete genomeexcisionase family DNA binding domain-containing protein1e-76287
NC_002944:865425:8864518864518877221272Mycobacterium avium subsp. paratuberculosis K-10, complete genomehypothetical protein8e-29128
NC_016906:4562874:4566492456649245677721281Gordonia polyisoprenivorans VH2 chromosome, complete genomeFtsK-like protein2e-1894
NC_015312:5579078:559097155909715591810840Pseudonocardia dioxanivorans CB1190 chromosome, complete genomecell division protein FtsK/SpoIIIE1e-1481.3
NC_015434:6020178:603507660350766035969894Verrucosispora maris AB-18-032 chromosome, complete genomecell division protein FtsK/SpoIIIE5e-1375.9
NC_014210:723719:7347047347047360441341Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,cell division protein FtsK/SpoIIIE2e-1274.3
NC_013729:2157785:217404721740472174889843Kribbella flavida DSM 17836, complete genomecell divisionFtsK/SpoIIIE1e-1068.6
NC_017904:4742775:4776318477631847777661449Mycobacterium sp. MOTT36Y chromosome, complete genomeDNA segregation ATPase FtsK/SpoIIIE-like protein1e-1068.2
NC_014391:6000834:601110460111046011976873Micromonospora aurantiaca ATCC 27029 chromosome, complete genomecell division protein FtsK/SpoIIIE4e-1066.6
NC_009077:3323291:3333139333313933345841446Mycobacterium sp. JLS, complete genomecell divisionFtsK/SpoIIIE1e-0965.1
NC_008705:3377697:3387545338754533889901446Mycobacterium sp. KMS, complete genomecell divisionFtsK/SpoIIIE1e-0965.1
NC_008146:3349415:3359263335926333607081446Mycobacterium sp. MCS, complete genomecell divisionFtsK/SpoIIIE1e-0965.1
NC_016947:2380500:2439572243957224410171446Mycobacterium intracellulare MOTT-02 chromosome, complete genomecell division family protein1e-0965.1
NC_014165:92500:99459994591008411383Thermobispora bispora DSM 43833 chromosome, complete genomecell division FtsK/SpoIIIE5e-0962.8
NC_014168:1963129:1977897197789719792881392Segniliparus rotundus DSM 44985 chromosome, complete genomecell division protein FtsK/SpoIIIE1e-0861.6
NC_008595:3914463:3924782392478239262241443Mycobacterium avium 104, complete genomecell divisionftsk/spoiiie5e-0859.3
NC_014211:439611:4523984523984538281431Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 plasmidcell division protein FtsK/SpoIIIE5e-0859.3
NC_009921:6691089:6691089669108966926601572Frankia sp. EAN1pec, complete genomecell divisionFtsK/SpoIIIE5e-0859.3
NC_013595:9547254:9559611955961195609631353Streptosporangium roseum DSM 43021, complete genomeDNA segregation ATPase FtsK/SpoIIIE and related protein-like protein1e-0757.8
NC_003888:4314389:4328871432887143301721302Streptomyces coelicolor A3(2), complete genomeftsK/spoIIIE family protein9e-0755.5