Pre_GI: BLASTP Hits

Some Help

Query: NC_016582:3563156:3565015 Streptomyces bingchenggensis BCW-1 chromosome, complete genome

Start: 3565015, End: 3568134, Length: 3120

Host Lineage: Streptomyces bingchenggensis; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Streptomyces bingchenggensis BCW-1 was isolated from a soil sample collected in Harbin, China. This species produces milbemycins, a family of macrocyclic lactones widely used in human health, animal health, and crop protection. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015164:2777008:2787427278742727895982172Bacteroides salanitronis DSM 18170 chromosome, complete genomeAlpha-N-acetylglucosaminidase2e-109397
NC_004663:5741436:5747129574712957493632235Bacteroides thetaiotaomicron VPI-5482, complete genomealpha-N-acetylglucosaminidase precursor8e-105382
NC_014041:1084246:1093953109395310962052253Zunongwangia profunda SM-A87 chromosome, complete genomehypothetical protein7e-92339
NC_014734:1757995:1764545176454517667612217Paludibacter propionicigenes WB4 chromosome, complete genomealpha-N-acetylglucosaminidase3e-76287
NC_017294:71494:8104181041837372697Candidatus Arthromitus sp. SFB-mouse-Yit, complete genomealpha-N-acetylglucosaminidase family protein6e-72273
NC_016582:3563156:356315635631563564100945Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein2e-1172.4
NC_016582:6811273:6813314681331468147561443Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein1e-0656.6