Pre_GI: BLASTP Hits

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Query: NC_016582:10227196:10249423 Streptomyces bingchenggensis BCW-1 chromosome, complete genome

Start: 10249423, End: 10251999, Length: 2577

Host Lineage: Streptomyces bingchenggensis; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Streptomyces bingchenggensis BCW-1 was isolated from a soil sample collected in Harbin, China. This species produces milbemycins, a family of macrocyclic lactones widely used in human health, animal health, and crop protection. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_002570:1195356:1201603120160312044072805Bacillus halodurans C-125, complete genomehypothetical protein0911
NC_016582:10159486:1019263510192635101951662532Streptomyces bingchenggensis BCW-1 chromosome, complete genomeFG-GAP repeat-containing protein0910
NC_019897:1224798:1260174126017412624652292Thermobacillus composti KWC4 chromosome, complete genomehypothetical protein0880
NC_010001:434803:4348034348034372142412Clostridium phytofermentans ISDg, complete genomeFG-GAP repeat protein0763
NC_020244:783125:7894507894507912671818Bacillus subtilis XF-1, complete genomehypothetical protein1e-87325
NC_014479:736102:7424377424377442451809Bacillus subtilis subsp. spizizenii str. W23 chromosome, completepolysaccharide lyase3e-87323
NC_014976:2981777:2988154298815429899981845Bacillus subtilis BSn5 chromosome, complete genomepolysaccharide lyase4e-87323
NC_016047:876875:8851438851438869811839Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completeFG-GAP repeat domain-containing protein6e-87322
NC_019896:3281193:3292046329204632939081863Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completehypothetical protein1e-86321
NC_017195:742298:7496597496597514971839Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completeFG-GAP repeat domain protein1e-86321
NC_014639:227118:2315722315722334221851Bacillus atrophaeus 1942 chromosome, complete genomepolysaccharide lyase2e-86321
CP002207:227118:2315722315722334221851Bacillus atrophaeus 1942, complete genomepolysaccharide lyase; lipoprotein2e-86321
NC_014479:736102:7405167405167423601845Bacillus subtilis subsp. spizizenii str. W23 chromosome, completepolysaccharide lyase; lipoprotein3e-86320
NC_000964:764118:7695717695717714331863Bacillus subtilis subsp. subtilis str. 168, complete genomehypothetical protein3e-86320
NC_014976:2981777:2990066299006629918831818Bacillus subtilis BSn5 chromosome, complete genomepolysaccharide lyase7e-86319
NC_017195:742298:7477697477697496131845Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completeFG-GAP repeat domain protein5e-86319
NC_016047:876875:8832528832528850961845Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completeFG-GAP repeat domain-containing protein5e-86319
NC_000964:764118:7714797714797733171839Bacillus subtilis subsp. subtilis str. 168, complete genomehypothetical protein8e-86318
NC_020244:783125:7875967875967893831788Bacillus subtilis XF-1, complete genomepolysaccharide lyase; lipoprotein2e-85317
UCMB5137:303641:3091533091533110031851Bacillus atrophaeus UCMB-5137BATR1942_01110; polysaccharide lyase; lipoprotein; (location [231571:233422] strand +); from Bacillus atrophaeus 1942, complete genome. [CP002207]2e-85317
UCMB5137:303641:3110773110773128941818Bacillus atrophaeus UCMB-5137polysaccharide lyase3e-83310
NC_014639:227118:2335262335262353131788Bacillus atrophaeus 1942 chromosome, complete genomepolysaccharide lyase3e-83310
CP002207:227118:2335262335262353131788Bacillus atrophaeus 1942, complete genomepolysaccharide lyase3e-83310
NC_016641:2700765:2700765270076527026301866Paenibacillus terrae HPL-003 chromosome, complete genomepolysaccharide lyase4e-82306
NC_015949:2418232:2449421244942124530593639Caldicellulosiruptor lactoaceticus 6A chromosome, complete genometype 3a cellulose-binding domain-containing protein2e-79298
NC_015949:6336:2449424494297945301Caldicellulosiruptor lactoaceticus 6A chromosome, complete genometype 3a cellulose-binding domain-containing protein1e-79298
NC_002570:1195356:1205572120557212087633192Bacillus halodurans C-125, complete genomehypothetical protein4e-79296
NC_011898:851892:8604348604348624642031Clostridium cellulolyticum H10, complete genomecellulosome protein dockerin type I8e-79295
NC_014393:1221000:1235585123558512381072523Clostridium cellulovorans 743B chromosome, complete genomeDockerin type 18e-79295
NC_012034:1925983:1929397192939719318982502Anaerocellum thermophilum DSM 6725, complete genomeCellulose 1,4-beta-cellobiosidase9e-78292
NC_014655:2581968:2591047259104725930562010Leadbetterella byssophila DSM 17132 chromosome, complete genomehypothetical protein1e-64248
NC_019896:3281193:3290491329049132919991509Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completehypothetical protein1e-54215
NC_015690:4469775:450747545074754507810336Paenibacillus mucilaginosus KNP414 chromosome, complete genomeYesX2e-1275.5