Pre_GI: BLASTP Hits

Some Help

Query: NC_015957:5109902:5114666 Streptomyces violaceusniger Tu 4113 chromosome, complete genome

Start: 5114666, End: 5114995, Length: 330

Host Lineage: Streptomyces violaceusniger; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Environment: Soil, Terrestrial; Temp: Mesophile. Streptomyces violaceusniger 16S rRNA gene clade form a gray aerial spore mass and a grayish-yellow substrate mycelium on oatmeal agar, and produce aerial hyphae that differentiate into spiral chains of rugose ornamented spores. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015957:5182460:521619152161915216520330Streptomyces violaceusniger Tu 4113 chromosome, complete genomeXRE family transcriptional regulator2e-56217
NC_016604:3097392:309846530984653098788324Mycobacterium rhodesiae NBB3 chromosome, complete genomeputative transcriptional regulator4e-33139
NC_016111:2912962:291823429182342918566333Streptomyces cattleya NRRL 8057, complete genometranscriptional regulator, XRE family1e-31135
NC_014830:850542:853993853993854316324Intrasporangium calvum DSM 43043 chromosome, complete genomehypothetical protein7e-25112
NC_014830:3870000:387679438767943877117324Intrasporangium calvum DSM 43043 chromosome, complete genomehypothetical protein7e-25112
NC_008726:6335961:633919263391926339506315Mycobacterium vanbaalenii PYR-1, complete genomeconserved hypothetical protein2e-0961.2
NC_009338:603663:609217609217609531315Mycobacterium gilvum PYR-GCK chromosome, complete genomehypothetical protein2e-0961.2
NC_015312:6398931:640413464041346404451318Pseudonocardia dioxanivorans CB1190 chromosome, complete genometranscriptional regulator6e-0959.7
NC_014814:4235477:426680742668074267121315Mycobacterium sp. Spyr1 chromosome, complete genometranscriptional regulator9e-0958.9
NC_015957:4963500:496901649690164969330315Streptomyces violaceusniger Tu 4113 chromosome, complete genometranscriptional regulator2e-0754.7
NC_019897:73957:125091125091125336246Thermobacillus composti KWC4 chromosome, complete genometranscriptional regulator1e-0652
NC_016943:4194002:425921642592164259560345Blastococcus saxobsidens DD2, complete genomehypothetical protein3e-0650.4
NC_016943:1356419:136125213612521361596345Blastococcus saxobsidens DD2, complete genomeputative XRE family transcriptional regulator3e-0650.4