Pre_GI: BLASTP Hits

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Query: NC_015848:2381148:2399404 Mycobacterium canettii CIPT 140010059, complete genome

Start: 2399404, End: 2400009, Length: 606

Host Lineage: Mycobacterium canettii; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: The Republic of Djibouti, Africa appears to be an exceptional place in terms of tuberculosis (TB) caused by Mycobacterium canettii, a highly unusual tubercle bacillus with unusual smooth colony morphology (STB) related to the M. tuberculosis complex (MTBC). M. canettii was first isolated from a 20-year-old French farmer suffering from pulmonary tuberculosis by G. Canetti in 1969. Since then, this strain has been isolated on rare occasions from patients who lived or were presumably infected in East Africa. It tends to preferentially affect children and foreigners in the Horn of Africa. M. canettii, a possible ancestor of the MTBC, is found almost exclusively in the Horn of Africa where TB is thought to have emerged about 40 000 years ago, coinciding with the expansion of human population out of Africa. The geographical restriction of M. canettii isolates and contrasting genetic diversity are characteristics compatible with a non-human reservoir. With the larger pan-genome reflecting the ancestral, wider gene pool of tubercle bacilli, their lower virulence and faster growth, especially at temperatures below 37 degrees C, plausibly reflecting broader environmental adaptability, STB strains might thus come nearer to the as-yet-unknown missing link between the obligate pathogen M. tuberculosis and environmental mycobacteria (adapted from PMIDs 20831613 and 23291586). Mycobacteria have an unusual outer membrane approximately 8nm thick, despite being considered Gram-positive. The outer membrane and the mycolic acid-arabinoglactan-peptidoglycan polymer form the cell wall, which constitutes an efficient permeability barrier in conjunction with the cell inner membrane.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_002944:2373873:238781023878102388772963Mycobacterium avium subsp. paratuberculosis K-10, complete genomehypothetical protein4e-34144
NC_014814:4235477:425605542560554256822768Mycobacterium sp. Spyr1 chromosome, complete genometransposase8e-26116
NC_014814:5422972:544779454477945448696903Mycobacterium sp. Spyr1 chromosome, complete genometransposase8e-26116
NC_014814:4235477:426286442628644263766903Mycobacterium sp. Spyr1 chromosome, complete genometransposase8e-26116
NC_016948:2033311:204063920406392041553915Mycobacterium intracellulare MOTT-64 chromosome, complete genomeintegrase catalytic subunit2e-24112
NC_016948:3724390:373107337310733731987915Mycobacterium intracellulare MOTT-64 chromosome, complete genomeintegrase catalytic subunit2e-24112
NC_014814:4326500:433364543336454334547903Mycobacterium sp. Spyr1 chromosome, complete genometransposase1e-24112
NC_016948:419500:429072429072429677606Mycobacterium intracellulare MOTT-64 chromosome, complete genomeintegrase catalytic subunit3e-24111
NC_004369:1268956:129963912996391300262624Corynebacterium efficiens YS-314, complete genomeputative transposase1e-1066.6
NC_014151:3611956:364870536487053649667963Cellulomonas flavigena DSM 20109 chromosome, complete genomeIntegrase catalytic region1e-0859.7
NC_013235:1325975:134253513425351343473939Nakamurella multipartita DSM 44233, complete genomeIntegrase catalytic region3e-0858.5
NC_013235:1325975:134609213460921347030939Nakamurella multipartita DSM 44233, complete genomeIntegrase catalytic region3e-0858.5
NC_008595:1413354:143857814385781439495918Mycobacterium avium 104, complete genometransposase5e-0857.8
NC_008595:5234467:524298552429855243902918Mycobacterium avium 104, complete genometransposase5e-0857.8
NC_008595:2687245:271463127146312715548918Mycobacterium avium 104, complete genometransposase5e-0857.8
NC_016906:2845424:285263928526392853592954Gordonia polyisoprenivorans VH2 chromosome, complete genometransposase for insertion sequence element IS986/IS61102e-0755.8
NC_013211:163390:178369178369179232864Acetobacter pasteurianus IFO 3283-01 plasmid pAPA01-020, completetransposase3e-0755.1
NC_017105:163390:178369178369179232864Acetobacter pasteurianus IFO 3283-01-42C plasmid pAPA42C_020,transposase3e-0755.1
NC_017113:163390:178369178369179232864Acetobacter pasteurianus IFO 3283-12 plasmid pAPA12-020, completetransposase3e-0755.1
NC_017118:163390:178369178369179232864Acetobacter pasteurianus IFO 3283-03 plasmid pAPA03-020, completetransposase3e-0755.1
NC_017122:163390:178369178369179232864Acetobacter pasteurianus IFO 3283-07 plasmid pAPA07-020, completetransposase3e-0755.1
NC_017126:163390:178369178369179232864Acetobacter pasteurianus IFO 3283-22 plasmid pAPA22-020, completetransposase3e-0755.1
NC_017131:163390:178369178369179232864Acetobacter pasteurianus IFO 3283-26 plasmid pAPA26-020, completetransposase3e-0755.1
NC_017149:163390:178369178369179232864Acetobacter pasteurianus IFO 3283-32 plasmid pAPA32-020, completetransposase3e-0755.1
NC_015572:2186394:222671822267182227620903Methylomonas methanica MC09 chromosome, complete genomeintegrase catalytic subunit4e-0754.7
NC_015740:141910:144238144238145140903Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completehypothetical protein7e-0753.9
NC_015740:2614317:262872226287222629624903Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completehypothetical protein7e-0753.9
NC_015671:1678088:168635816863581686579222Cellvibrio gilvus ATCC 13127 chromosome, complete genome1e-0653.5
NC_011365:1969198:199121819912181991595378Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genometransposase1e-0653.1
NC_014830:3870000:387504038750403875975936Intrasporangium calvum DSM 43043 chromosome, complete genomeIntegrase catalytic region2e-0652
NC_013235:3812838:383042938304293831334906Nakamurella multipartita DSM 44233, complete genomeIntegrase catalytic region9e-0650.1
NC_006087:765081:774076774076774579504Leifsonia xyli subsp. xyli str. CTCB07, complete genome9e-0650.1