Pre_GI: BLASTP Hits

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Query: NC_015761:4355335:4364626 Salmonella bongori NCTC 12419, complete genome

Start: 4364626, End: 4366296, Length: 1671

Host Lineage: Salmonella bongori; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella bongori is the second species of Salmonella after Salmonella enterica and is considered a distant outgroup. This species is reptile-specific, is rarely found in human infections and it lacks SPI-2. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013508:2870954:2879156287915628805651410Edwardsiella tarda EIB202, complete genomehypothetical protein2e-179629
NC_014121:1101093:1117283111728311187161434Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein2e-75283
NC_015312:5579078:5585339558533955868141476Pseudonocardia dioxanivorans CB1190 chromosome, complete genomehypothetical protein2e-47190
NC_003888:5790104:5805823580582358073341512Streptomyces coelicolor A3(2), complete genomehypothetical protein8e-45182
NC_016609:4233701:4269694426969442710641371Niastella koreensis GR20-10 chromosome, complete genomehypothetical protein1e-1172
NC_015635:5511994:5530944553094455324251482Microlunatus phosphovorus NM-1, complete genomehypothetical protein7e-1066.2
NC_015510:1978539:1985746198574619872271482Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomehypothetical protein2e-0861.2
NC_007494:867901:8768188768188780741257Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequencehypothetical protein5e-0756.6