Pre_GI: BLASTP Hits

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Query: NC_015761:299386:318787 Salmonella bongori NCTC 12419, complete genome

Start: 318787, End: 319434, Length: 648

Host Lineage: Salmonella bongori; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella bongori is the second species of Salmonella after Salmonella enterica and is considered a distant outgroup. This species is reptile-specific, is rarely found in human infections and it lacks SPI-2. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009708:915814:917099917099917800702Yersinia pseudotuberculosis IP 31758 chromosome, complete genometranscriptional regulator4e-36150
NC_011415:308825:322797322797323501705Escherichia coli SE11 chromosome, complete genomehypothetical protein9e-34143
NC_013421:1505176:150592715059271506625699Pectobacterium wasabiae WPP163, complete genomeregulatory protein DeoR5e-33140
NC_012917:3241196:326367232636723264370699Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeregulatory protein DeoR6e-33140
NC_016612:443398:459588459588460292705Klebsiella oxytoca KCTC 1686 chromosome, complete genomehypothetical protein4e-32137
NC_016816:1137904:115333711533371154041705Pantoea ananatis LMG 5342, complete genometranscriptional regulator4e-32137
NC_000913:2746886:276772527677252768426702Escherichia coli K12, complete genomeCP4-57 prophage; predicted DNA-binding transcriptional regulator1e-30133
AC_000091:2747520:276835927683592769060702Escherichia coli W3110 DNA, complete genomepredicted DNA-binding transcriptional regulator1e-30133
NC_010473:2839902:285949028594902860191702Escherichia coli str. K-12 substr. DH10B, complete genomeCP4-57 prophage; predicted DNA-binding transcriptional regulator1e-30133
NC_012759:2633949:265353726535372654238702Escherichia coli BW2952 chromosome, complete genomeCP4-57 prophage; putative DNA-binding transcriptional regulator1e-30133
NC_011274:311843:316156316156316869714Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91DNA-binding protein4e-30130
NC_014618:4114004:412273941227394123437699Enterobacter cloacae SCF1 chromosome, complete genomeregulatory protein DeoR7e-30130
NC_013592:3263005:326603132660313266717687Dickeya dadantii Ech586, complete genomeregulatory protein DeoR2e-29129
NC_014121:3776902:378903437890343789771738Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeregulatory protein DeoR1e-28126
NC_020260:882307:896894896894897631738Cronobacter sakazakii Sp291, complete genomeregulatory protein DeoR1e-28126
NC_014618:690056:720643720643721353711Enterobacter cloacae SCF1 chromosome, complete genomeregulatory protein DeoR2e-26119
NC_013353:5272863:528559852855985286314717Escherichia coli O103:H2 str. 12009, complete genometranscription repressor2e-23109
AP010958:5272863:528559852855985286314717Escherichia coli O103:H2 str. 12009 DNA, complete genomepredicted transcription repressor2e-23109
NC_011283:4966471:498746449874644988180717Klebsiella pneumoniae 342 chromosome, complete genometranscriptional regulator2e-22105
NC_020418:116500:132123132123132830708Morganella morganii subsp. morganii KT, complete genomeputative transcriptional regulator7e-21100
NC_020260:603796:630428630428631126699Cronobacter sakazakii Sp291, complete genomeregulatory protein DeoR9e-1993.6
NC_015663:1356982:137513513751351375824690Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein4e-1891.3
NC_016902:4236680:424490342449034245586684Escherichia coli KO11FL chromosome, complete genomeregulatory protein DeoR1e-1789.7
CP002516:4236680:424490342449034245586684Escherichia coli KO11, complete genomeregulatory protein DeoR1e-1789.7
CP002185:4750571:476728347672834767966684Escherichia coli W, complete genomePredicted transcriptional regulator1e-1789.7
NC_007946:4875997:489077948907794891459681Escherichia coli UTI89, complete genomehypothetical protein2e-1789.4
NC_008253:4817864:483127748312774831957681Escherichia coli 536, complete genomehypothetical protein2e-1789.4
NC_008563:4707826:471267847126784713358681Escherichia coli APEC O1, complete genomeputative transcriptional regulator1e-1686.3
NC_004431:4319152:433552143355214336201681Escherichia coli CFT073, complete genomeHypothetical transcriptional regulator yfjR2e-1685.9