Pre_GI: BLASTP Hits

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Query: NC_015761:2982000:2990919 Salmonella bongori NCTC 12419, complete genome

Start: 2990919, End: 2991974, Length: 1056

Host Lineage: Salmonella bongori; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella bongori is the second species of Salmonella after Salmonella enterica and is considered a distant outgroup. This species is reptile-specific, is rarely found in human infections and it lacks SPI-2. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012724:2547500:2561621256162125627451125Burkholderia glumae BGR1 chromosome 1, complete genomehypothetical protein2e-52206
NC_020126:8512908:8524253852425385252961044Myxococcus stipitatus DSM 14675, complete genomehypothetical protein3e-1583.2
NC_020126:2216926:2225356222535622264081053Myxococcus stipitatus DSM 14675, complete genomehypothetical protein2e-1480.1
NC_008095:6323456:6339850633985063408991050Myxococcus xanthus DK 1622, complete genomehypothetical protein9e-1271.6
NC_007645:5801295:5818665581866558197021038Hahella chejuensis KCTC 2396, complete genome3-oxoacyl-(acyl-carrier-protein) synthase2e-1170.1
NC_015711:8169752:820197482019748202936963Myxococcus fulvus HW-1 chromosome, complete genomehypothetical protein6e-1168.6
NC_020126:7451894:7461992746199274630471056Myxococcus stipitatus DSM 14675, complete genomehypothetical protein2e-1067
NC_015711:3546500:3555747355574735568381092Myxococcus fulvus HW-1 chromosome, complete genomehypothetical protein1e-0964.3
NC_020126:3383902:3388760338876033898811122Myxococcus stipitatus DSM 14675, complete genomehypothetical protein2e-0860.8
NC_020126:8885518:8894708889470888957781071Myxococcus stipitatus DSM 14675, complete genomehypothetical protein1e-0757.8
NC_011989:2795811:2803578280357828046331056Agrobacterium vitis S4 chromosome 1, complete sequencebeta-ketoacyl synthase domain-containing protein3e-0653.1