Pre_GI: BLASTP Hits

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Query: NC_015761:2982000:2987903 Salmonella bongori NCTC 12419, complete genome

Start: 2987903, End: 2988832, Length: 930

Host Lineage: Salmonella bongori; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella bongori is the second species of Salmonella after Salmonella enterica and is considered a distant outgroup. This species is reptile-specific, is rarely found in human infections and it lacks SPI-2. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011989:2795811:2799426279942628004661041Agrobacterium vitis S4 chromosome 1, complete sequencehypothetical protein2e-1377
NC_011989:2795811:280054228005422801516975Agrobacterium vitis S4 chromosome 1, complete sequencehypothetical protein1e-0860.8
NC_012724:2547500:255957125595712560557987Burkholderia glumae BGR1 chromosome 1, complete genomehypothetical protein5e-0858.5
NC_009778:259241:2712282712282724241197Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein2e-0653.1
NC_009778:259241:2699822699822711781197Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein3e-0653.1