Pre_GI: BLASTP Hits

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Query: NC_015761:2726000:2730135 Salmonella bongori NCTC 12419, complete genome

Start: 2730135, End: 2731034, Length: 900

Host Lineage: Salmonella bongori; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella bongori is the second species of Salmonella after Salmonella enterica and is considered a distant outgroup. This species is reptile-specific, is rarely found in human infections and it lacks SPI-2. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011294:2890500:289455728945572895465909Salmonella enterica subsp. enterica serovar Enteritidis strpathogenicity island membrane protein3e-130464
NC_011274:2881306:288536228853622886270909Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91pathogenicity island membrane protein3e-130464
NC_003197:3005842:300989830098983010806909Salmonella typhimurium LT2, complete genomesecreted effector protein4e-129461
NC_011094:2913500:291709529170952917961867Salmonella enterica subsp. enterica serovar Schwarzengrund strsecreted effector protein9e-129459
NC_011149:2912219:291841529184152919281867Salmonella enterica subsp. enterica serovar Agona str. SL483,secreted effector protein6e-128457
NC_016860:3029272:303332830333283034194867Salmonella enterica subsp. enterica serovar Typhimurium strsecreted effector protein3e-127454
NC_016857:3028421:303247730324773033382906Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74AvrA5e-127454
NC_016810:3028421:303247730324773033382906Salmonella enterica subsp. enterica serovar Typhimurium strAvirulence determinant of plant pathogenic bacteria5e-127454
NC_011083:2980356:298441229844122985254843Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,secreted effector protein4e-126451
NC_016831:2867766:287185128718512872687837Salmonella enterica subsp. enterica serovar Gallinarum/pullorumpathogenicity island membrane protein2e-123442
NC_017046:3027161:303121730312173032056840Salmonella enterica subsp. enterica serovar Typhimurium str. 798Avirulence determinant of plant pathogenic bacteria3e-123441
NC_011205:3050235:305432030543203055156837Salmonella enterica subsp. enterica serovar Dublin str. CT_020218539e-123439
NC_011080:2982346:298644229864422987245804Salmonella enterica subsp. enterica serovar Newport str. SL254,2e-116419
NC_016863:2974333:297846029784602979296837Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1secreted effector protein2e-109395
NC_014932:1232346:1259472125947212605181047Bartonella clarridgeiae 73, complete genomehypothetical protein8e-56217
NC_004605:1385444:141653514165351417404870Vibrio parahaemolyticus RIMD 2210633 chromosome II, completeputative targeted effector protein YopP5e-34145
NC_008752:2936933:2975434297543429765551122Acidovorax avenae subsp. citrulli AAC00-1, complete genomepeptidase C554e-1065.9
NC_008752:3217695:3227189322718932283101122Acidovorax avenae subsp. citrulli AAC00-1, complete genomepeptidase C554e-1065.9