Pre_GI: BLASTP Hits

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Query: NC_015733:1179977:1191396 Pseudomonas putida S16 chromosome, complete genome

Start: 1191396, End: 1192982, Length: 1587

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011283:1307173:1313264131326413148681605Klebsiella pneumoniae 342 chromosome, complete genomeP-type conjugative transfer protein TrbL1e-115417
NC_006513:38818:4999349993515971605Azoarcus sp. EbN1, complete genomeplasmid like TrbL protein, component of conjugation system2e-1997.8
NC_020063:3690308:3726329372632937277231395Enterobacteriaceae bacterium strain FGI 57, complete genomeP-type conjugative transfer protein TrbL1e-1791.7
NC_016602:2854107:2867942286794228695641623Vibrio furnissii NCTC 11218 chromosome 1, complete sequenceTrbL/VirB6 plasmid conjugal transfer protein7e-1789.4
NC_009800:2651730:2658945265894526603361392Escherichia coli HS, complete genomeP-type conjugative transfer protein TrbL2e-1687.8
NC_016745:2028424:2045659204565920472781620Oceanimonas sp. GK1 chromosome, complete genomeTrbL/VirB6 plasmid conjugal transfer protein2e-1687.4
NC_008752:415599:4244274244274263701944Acidovorax avenae subsp. citrulli AAC00-1, complete genomeTrbL/VirB6 plasmid conjugal transfer protein2e-1378.2
NC_008781:2611702:2639965263996526415901626Polaromonas naphthalenivorans CJ2, complete genomeType IV secretory pathway TrbL components-like protein1e-1275.1
NC_006371:1743982:1752944175294417542571314Photobacterium profundum SS9 chromosome 2, complete sequencehypothetical TrbL protein9e-1272.4
NC_013456:3011518:3023677302367730252811605Vibrio sp. Ex25 chromosome 1, complete genomeconjugative transfer protein TrbL4e-1067
NC_008800:1300500:1316984131698413183841401Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,putative conjugal transfer protein2e-0964.7
NC_011000:183928:1953651953651967921428Burkholderia cenocepacia J2315 chromosome 1, complete sequenceputative plasmid conjugal transfer protein6e-0962.8
NC_006350:3865584:3877520387752038789501431Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative plasmid conjugal transfer protein9e-0962.4
NC_013722:1816561:1856743185674318581701428Xanthomonas albilineans, complete genomeputative conjugal transfer protein2e-0861.2
NC_008463:1293079:1314366131436613159881623Pseudomonas aeruginosa UCBPP-PA14, complete genomeputative mating pair formation protein TrbL7e-0859.3
NC_008782:2683989:2701523270152327031211599Acidovorax sp. JS42, complete genomeTrbL/VirB6 plasmid conjugal transfer protein3e-0757