Pre_GI: BLASTP Hits

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Query: NC_015571:2044000:2085082 Porphyromonas gingivalis TDC60, complete genome

Start: 2085082, End: 2085459, Length: 378

Host Lineage: Porphyromonas gingivalis; Porphyromonas; Porphyromonadaceae; Bacteroidales; Bacteroidetes; Bacteria

General Information: This organism is associated with severe and chronic periodontal (tissues surrounding and supporting the tooth) diseases. Progression of the disease is caused by colonization by this organism in an anaerobic environment in host tissues and severe progression results in loss of the tissues supporting the tooth and eventually loss of the tooth itself. The black pigmentation characteristic of this bacterium comes from iron acquisition that does not use the typical siderophore system of other bacteria but accumulates hemin. Peptides appear to be the predominant carbon and energy source of this organism, perhaps in keeping with its ability to destroy host tissue. Oxygen tolerance systems play a part in establishment of the organism in the oral cavity, including a superoxide dismutase. Pathogenic factors include extracellular adhesins that mediate interactions with other bacteria as well as the extracellular matrix, and a host of degradative enzymes that are responsible for tissue degradation and spread of the organism including the gingipains, which are trypsin-like cysteine proteases.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_019960:1658657:1729657172965717309011245Prevotella dentalis DSM 3688 chromosome 1, complete sequencesite-specific recombinase XerD2e-25114
NC_015311:2626850:2634215263421526353181104Prevotella denticola F0289 chromosome, complete genome6e-25112
NC_019960:1126000:1139831113983111410451215Prevotella dentalis DSM 3688 chromosome 1, complete sequencesite-specific recombinase XerD2e-1994.4
NC_019968:1084288:1095661109566110968631203Prevotella dentalis DSM 3688 chromosome 2, complete sequencesite-specific recombinase XerD2e-1064.7
NC_006347:3390193:3410207341020734114181212Bacteroides fragilis YCH46, complete genometyrosine type site-specific recombinase4e-1063.5
NC_019968:1235500:1275493127549312766951203Prevotella dentalis DSM 3688 chromosome 2, complete sequencesite-specific recombinase XerD6e-1062.8
NC_015311:2626850:2649110264911026503121203Prevotella denticola F0289 chromosome, complete genomesite-specific recombinase, phage integrase family2e-0961.2
NC_002950:1511955:1535739153573915369411203Porphyromonas gingivalis W83, complete genomeintegrase2e-0961.2