Pre_GI: BLASTP Hits

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Query: NC_015571:2044000:2054215 Porphyromonas gingivalis TDC60, complete genome

Start: 2054215, End: 2055225, Length: 1011

Host Lineage: Porphyromonas gingivalis; Porphyromonas; Porphyromonadaceae; Bacteroidales; Bacteroidetes; Bacteria

General Information: This organism is associated with severe and chronic periodontal (tissues surrounding and supporting the tooth) diseases. Progression of the disease is caused by colonization by this organism in an anaerobic environment in host tissues and severe progression results in loss of the tissues supporting the tooth and eventually loss of the tooth itself. The black pigmentation characteristic of this bacterium comes from iron acquisition that does not use the typical siderophore system of other bacteria but accumulates hemin. Peptides appear to be the predominant carbon and energy source of this organism, perhaps in keeping with its ability to destroy host tissue. Oxygen tolerance systems play a part in establishment of the organism in the oral cavity, including a superoxide dismutase. Pathogenic factors include extracellular adhesins that mediate interactions with other bacteria as well as the extracellular matrix, and a host of degradative enzymes that are responsible for tissue degradation and spread of the organism including the gingipains, which are trypsin-like cysteine proteases.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007005:3199820:322242432224243223383960Pseudomonas syringae pv. syringae B728a, complete genomehypothetical protein3e-0962.8
NC_002947:4167500:422688042268804227839960Pseudomonas putida KT2440, complete genomehypothetical protein1e-0860.8
NC_014664:3003633:300410130041013005072972Rhodomicrobium vannielii ATCC 17100 chromosome, complete genomeRimK domain protein ATP-grasp4e-0859.3
NC_020829:2754203:277732127773212778274954Pseudomonas denitrificans ATCC 13867, complete genomehypothetical protein4e-0755.8
NC_011601:2139188:216633921663392167244906Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehypothetical protein1e-0654.3
NC_009792:3665369:367905536790553680008954Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein4e-0652.4