Pre_GI: BLASTP Hits

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Query: NC_015410:2351464:2359159 Pseudomonas mendocina NK-01 chromosome, complete genome

Start: 2359159, End: 2360901, Length: 1743

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocin is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004578:4204235:4219432421943242212041773Pseudomonas syringae pv. tomato str. DC3000, complete genomeABC transporter, periplasmic substrate-binding protein, putative0883
NC_015563:6167512:6183747618374761854801734Delftia sp. Cs1-4 chromosome, complete genomeextracellular solute-binding protein0808
NC_010002:1145951:1145951114595111476841734Delftia acidovorans SPH-1, complete genomeextracellular solute-binding protein, family 10808
NC_008782:401667:4016674016674034001734Acidovorax sp. JS42, complete genomeextracellular solute-binding protein, family 10792
NC_011992:392534:3925343925343942671734Acidovorax ebreus TPSY, complete genomeextracellular solute-binding protein0792
NC_007347:2421942:2437098243709824388371740Ralstonia eutropha JMP134 chromosome 1, complete sequenceextracellular solute-binding protein, family 10775
NC_007908:4069150:4090858409085840925911734Rhodoferax ferrireducens T118, complete genomeextracellular solute-binding protein, family 10771
NC_007645:1443296:1464373146437314661331761Hahella chejuensis KCTC 2396, complete genomeABC-type sugar transport system, periplasmic component0685
NC_013642:942767:9781219781219795451425Thermotoga naphthophila RKU-10, complete genomeextracellular solute-binding protein family 19e-30132
NC_018644:637497:6461086461086474181311Alpha proteobacterium HIMB59 chromosome, complete genomecarbohydrate ABC transporter substrate-binding protein, CUT1 family3e-1584
NC_018643:1309804:1326753132675313282911539Alpha proteobacterium HIMB5 chromosome, complete genomecarbohydrate ABC transporter substrate-binding protein, CUT1 family3e-1067.4
NC_015137:2616222:2668941266894126702721332Burkholderia sp. CCGE1001 chromosome 2, complete sequencefamily 1 extracellular solute-binding protein1e-0965.5
NC_018644:478077:4903404903404918661527Alpha proteobacterium HIMB59 chromosome, complete genomecarbohydrate ABC transporter substrate-binding protein, CUT1 family4e-0860.5
NC_018644:210627:2203982203982219151518Alpha proteobacterium HIMB59 chromosome, complete genomecarbohydrate ABC transporter substrate-binding protein, CUT1 family4e-0860.5
NC_009828:1474970:1491131149113114924261296Thermotoga lettingae TMO, complete genomeextracellular solute-binding protein family 13e-0757
NC_013642:942767:9427679427679440771311Thermotoga naphthophila RKU-10, complete genomeextracellular solute-binding protein family 14e-0757