Pre_GI: BLASTP Hits

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Query: NC_015379:6226661:6236400 Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,

Start: 6236400, End: 6237452, Length: 1053

Host Lineage: Pseudomonas brassicacearum; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas brassicacearum is a Gram-negative soil bacterium that infects the roots of Brassica napus, from which it derives its name. Based on 16S rRNA analysis, P. brassicacearum falls within the P. fluorescens group. It has also been shown to have both pathogenic and plant growth-promoting effects on tomato plants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010645:369408:3851343851343861861053Bordetella avium 197N, complete genomeconjugal transfer protein8e-137486
NC_002927:506183:5190955190955201471053Bordetella bronchiseptica RB50, complete genomeplasmid-related membrane protein2e-136485
NC_015458:2338437:2352774235277423538561083Pusillimonas sp. T7-7 chromosome, complete genomeTraH protein5e-61234
NC_013722:3117442:3126963312696331280571095Xanthomonas albilineans, complete genomeputative conjugal transfer protein1e-45183
NC_004578:568236:582174582174583040867Pseudomonas syringae pv. tomato str. DC3000, complete genome8e-32137
NC_002928:507749:521064521064521819756Bordetella parapertussis 12822, complete genomeplasmid-related protein6e-23108
NC_012969:2476318:2503508250350825046261119Methylovorus glucosetrophus SIP3-4 chromosome, complete genomeTrbL/VirB6 plasmid conjugal transfer protein4e-0756.2
NC_010524:933191:9331919331919342281038Leptothrix cholodnii SP-6, complete genomeTrbL/VirB6 plasmid conjugal transfer protein3e-0652.8
NC_009254:365812:3682773682773694401164Burkholderia vietnamiensis G4 chromosome 3, complete sequenceTrbL/VirB6 plasmid conjugal transfer protein7e-0652