Pre_GI: BLASTP Hits

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Query: NC_015275:911999:917798 Clostridium lentocellum DSM 5427 chromosome, complete genome

Start: 917798, End: 918166, Length: 369

Host Lineage: Cellulosilyticum lentocellum; Cellulosilyticum; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolation: River sediment with paper mill waste; Temp: Mesophile; Temp: 40C; Isolation:river sediment with paper mill waste; Country:United Kingdom: River Don, Scotland. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. This is a cellulolytic bacterium isolated from river sediment containing paper-mill waste.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014376:787460:802135802135802659525Clostridium saccharolyticum WM1 chromosome, complete genometranscriptional regulator, XRE family2e-2097.8
NC_014624:2944437:296281829628182963192375Eubacterium limosum KIST612 chromosome, complete genometranscriptional regulator1e-1891.7
NC_014624:2996377:300359730035973003974378Eubacterium limosum KIST612 chromosome, complete genomehypothetical protein2e-1271.2
NC_009454:2663539:269640926964092696924516Pelotomaculum thermopropionicum SI, complete genometranscriptional regulator1e-1168.6
NC_015578:3266855:327864532786453278992348Treponema primitia ZAS-2 chromosome, complete genomehelix-turn-helix domain-containing protein5e-1166.6
NC_015577:427752:445381445381445740360Treponema azotonutricium ZAS-9 chromosome, complete genomehelix-turn-helix domain-containing protein2e-1064.7
NC_011979:1683964:169505416950541695683630Geobacter sp. FRC-32, complete genometranscriptional regulator, XRE family6e-1062.8
NC_013799:810636:835033835033835740708Hydrogenobacter thermophilus TK-6, complete genomeputative prophage repressor1e-0858.5
NC_017161:810627:835024835024835959936Hydrogenobacter thermophilus TK-6 chromosome, complete genomeXRE family transcriptional regulator2e-0858.2
NC_015663:4522109:453774545377454538440696Enterobacter aerogenes KCTC 2190 chromosome, complete genomeputative phage repressor protein CI3e-0753.9
CU928145:824367:827354827354828109756Escherichia coli 55989 chromosome, complete genomeRegulatory protein CI from bacteriophage origin3e-0753.5
NC_011751:643976:651596651596652351756Escherichia coli UMN026 chromosome, complete genomeregulatory protein CI from bacteriophage origin3e-0753.5
NC_011748:824367:827354827354828109756Escherichia coli 55989, complete genomeRegulatory protein CI from bacteriophage origin3e-0753.5
NC_012440:1709416:173557317355731736052480Persephonella marina EX-H1, complete genometranscriptional regulator, xre family4e-0753.5
NC_014624:1768226:180091118009111801279369Eubacterium limosum KIST612 chromosome, complete genomehypothetical protein3e-0650.8
NC_021175:881845:894262894262894738477Streptococcus oligofermentans AS 1.3089, complete genomeDNA-binding helix-turn-helix protein3e-0650.4