Pre_GI: BLASTP Hits

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Query: NC_015275:3761889:3780549 Clostridium lentocellum DSM 5427 chromosome, complete genome

Start: 3780549, End: 3781031, Length: 483

Host Lineage: Cellulosilyticum lentocellum; Cellulosilyticum; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolation: River sediment with paper mill waste; Temp: Mesophile; Temp: 40C; Isolation:river sediment with paper mill waste; Country:United Kingdom: River Don, Scotland. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. This is a cellulolytic bacterium isolated from river sediment containing paper-mill waste.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003413:694475:714293714293714814522Pyrococcus furiosus DSM 3638, complete genomehypothetical protein3e-1374.3
NC_010729:1344903:134771313477131348273561Porphyromonas gingivalis ATCC 33277, complete genomeprobable flavodoxin3e-1374.3
NC_014323:2680085:272346027234602723942483Herbaspirillum seropedicae SmR1 chromosome, complete genomeflavodoxin protein9e-1372.8
NC_021182:3525523:354854235485423549207666Clostridium pasteurianum BC1, complete genomeflavodoxin4e-1063.9
NC_008687:388262:406649406649407218570Paracoccus denitrificans PD1222 chromosome 2, complete sequencetwin-arginine translocation pathway signal6e-1063.2
NC_013517:3385166:338965933896593390141483Sebaldella termitidis ATCC 33386, complete genomeputative flavodoxin7e-1063.2
NC_013921:755800:769881769881770375495Thermoanaerobacter italicus Ab9 chromosome, complete genomehypothetical protein5e-0960.1
NC_010321:1616362:162870316287031629197495Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completehypothetical protein9e-0959.3
NC_014964:1608575:162091616209161621410495Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completehypothetical protein9e-0959.3
NC_015172:1334958:136598313659831366465483Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeflavodoxin1e-0858.9
NC_014363:232385:250678250678251139462Olsenella uli DSM 7084 chromosome, complete genomeputative flavodoxin4e-0857.4
NC_013592:3212834:323065132306513231169519Dickeya dadantii Ech586, complete genomeflavodoxin5e-0857
NC_003552:484000:489540489540490079540Methanosarcina acetivorans C2A, complete genomehypothetical protein9e-0856.2
NC_020409:1173796:119243011924301193122693Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeputative flavodoxin2e-0755.1
NC_012225:316000:316566316566317069504Brachyspira hyodysenteriae WA1, complete genomeflavodoxin2e-0755.1
NC_009515:474285:476897476897477364468Methanobrevibacter smithii ATCC 35061, complete genomeflavodoxin, FldA3e-0754.3
NC_014209:1392115:139637813963781396908531Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,hypothetical protein4e-0753.9
NC_016776:2549465:256480325648032565375573Bacteroides fragilis 638R, complete genomehypothetical protein4e-0753.9
NC_015385:2050648:2054006205400620554901485Treponema succinifaciens DSM 2489 chromosome, complete genome7e-0753.1
NC_007355:923218:931948931948932487540Methanosarcina barkeri str. fusaro chromosome 1, complete sequencehypothetical protein1e-0652.8
NC_003228:2473956:249001024900102490582573Bacteroides fragilis NCTC 9343, complete genomeflavodoxin1e-0652.4
NC_009051:2365711:236571123657112366196486Methanoculleus marisnigri JR1, complete genomehypothetical protein2e-0651.2
NC_013665:415998:416975416975417442468Methanocella paludicola SANAE, complete genomehypothetical protein4e-0650.8
NC_016830:3697173:369658036965803697176597Pseudomonas fluorescens F113 chromosome, complete genometwin-arginine translocation pathway signal4e-0650.4