Pre_GI: BLASTP Hits

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Query: NC_014834:872924:894178 Rhodopseudomonas palustris DX-1 chromosome, complete genome

Start: 894178, End: 894723, Length: 546

Host Lineage: Rhodopseudomonas palustris; Rhodopseudomonas; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Environment: Fresh water, Soil; Temp: Mesophile. This organism has a diverse metabolism and is capable of growth using light, inorganic, or organic compounds as energy sources and carbon dioxide or organic compounds as carbon sources. Commonly found in soil and water environments this bacterium is also capable of degrading a wide range of toxic organic compounds, and may be of use in bioremediation of polluted sites. The bacterium undergoes differentiation to produce a stalked nonmotile cell and a motile flagellated cell. In the presence of light, this bacterium produces a number of intracellular membranous vesicles to house the photosynthetic reaction centers.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009668:445134:513800513800514345546Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequenceconjugal transfer protein precursor2e-63241
NC_009720:4406991:444132044413204441865546Xanthobacter autotrophicus Py2, complete genomepeptidase S26C conjugative transfer signal peptidase TraF1e-62238
NC_009720:622262:655257655257655802546Xanthobacter autotrophicus Py2, complete genomeconjugal transfer protein precursor5e-62236
NC_008686:1472899:147606614760661476608543Paracoccus denitrificans PD1222 chromosome 1, complete sequenceconjugal transfer protein precursor3e-59227
NC_007925:3933765:395422639542263954771546Rhodopseudomonas palustris BisB18, complete genomeconjugal transfer protein precursor2e-55214
NC_017249:18493:428124281243357546Bradyrhizobium japonicum USDA 6, complete genomeconjugal transfer protein precursor6e-48189
NC_004463:18497:428204282043365546Bradyrhizobium japonicum USDA 110, complete genomeconjugal transfer protein precursor6e-48189
NC_011365:1135750:116187311618731162415543Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeputative conjugal transfer protein TraF4e-41167
NC_017249:3119000:312008131200813120593513Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein1e-39162
NC_010125:381711:398827398827399456630Gluconacetobacter diazotrophicus PAl 5, complete genomeputative conjugal transfer protein TraF4e-35147
NC_016027:2512297:251408825140882514717630Gluconacetobacter xylinus NBRC 3288, complete genomeconjugal transfer protein precursor4e-31134
NC_015556:2265940:228680622868062287333528Pseudomonas fulva 12-X chromosome, complete genomePeptidase S26, conserved region3e-28124
NC_015186:2908387:291388729138872914426540Acidiphilium multivorum AIU301, complete genomeputative conjugal transfer protein TraF3e-27120
NC_014414:2540189:254347825434782544173696Parvularcula bermudensis HTCC2503 chromosome, complete genomeconjugal transfer protein8e-26116
NC_010338:2443765:244452124445212445039519Caulobacter sp. K31, complete genomeType IV secretory pathway protease TraF-like protein2e-25115
NC_014100:2782000:279994627999462800458513Caulobacter segnis ATCC 21756 chromosome, complete genomepeptidase S26, conserved region4e-25114
NC_014910:242845:262595262595263194600Alicycliphilus denitrificans BC chromosome, complete genomepeptidase s26, conserved region protein2e-24112
NC_015381:2859000:289326828932682893870603Burkholderia gladioli BSR3 chromosome 1, complete sequencehypothetical protein2e-23108
NC_008577:1455000:148007914800791480666588Shewanella sp. ANA-3 chromosome 1, complete sequenceputative conjugal transfer TRAF transmembrane protein8e-23106
NC_016147:1961000:199013719901371990736600Pseudoxanthomonas spadix BD-a59 chromosome, complete genometype IV secretion system protein3e-22104
NC_008752:725189:749121749121749732612Acidovorax avenae subsp. citrulli AAC00-1, complete genomeputative conjugal transfer TRAF transmembrane protein1e-2099.4
NC_003295:2787371:280686628068662807465600Ralstonia solanacearum GMI1000, complete genomePROBABLE CONJUGAL TRANSFER TRAF TRANSMEMBRANE PROTEIN2e-2098.2
NC_010943:1332243:134805613480561348631576Stenotrophomonas maltophilia K279a, complete genomeputative transmembrane anchor conjugal transfer protein4e-2097.4
NC_014500:842493:867251867251867796546Dickeya dadantii 3937 chromosome, complete genometype IV secretory pathway, protease TraF1e-1995.9
NC_009719:1972545:197197919719791972557579Parvibaculum lavamentivorans DS-1 chromosome, complete genomeplasmid transfer protein TraF9e-1993.2
NC_010170:4800000:482394348239434824533591Bordetella petrii, complete genomeconjugal transfer protein TraF9e-1786.3
NC_012982:711122:728334728334728825492Hirschia baltica ATCC 49814, complete genomeplasmid transfer protein TraF6e-1580.5
NC_006526:1976779:199656919965691997324756Zymomonas mobilis subsp. mobilis ZM4, complete genomeconjugal transfer protein5e-1167
NC_015221:12389:337623376234301540Nitrosomonas sp. AL212 plasmid pNAL21202, complete sequenceconjugative transfer signal peptidase TraF1e-1065.9
NC_006371:1743982:176795617679561768483528Photobacterium profundum SS9 chromosome 2, complete sequencehypothetical conjugal transfer protein TraF2e-0962
NC_011059:670345:670345670345671007663Prosthecochloris aestuarii DSM 271, complete genomeputative conjugal transfer protein TraF9e-0856.6
NC_011991:65368:694356943569968534Agrobacterium vitis S4 plasmid pAtS4b, complete sequenceconjugative transfer signal peptidase TraF3e-0754.7
NC_008781:2655071:266722726672272667751525Polaromonas naphthalenivorans CJ2, complete genomeconserved hypothetical conjugal transfer protein TraF1e-0652.8
NC_013422:1732677:175254817525481753081534Halothiobacillus neapolitanus c2, complete genomePeptidase S26, conserved region8e-0650.1