Pre_GI: BLASTP Hits

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Query: NC_014169:1909482:1928406 Bifidobacterium longum subsp. longum JDM301 chromosome, complete

Start: 1928406, End: 1928753, Length: 348

Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. This organism is found in adult humans and formula fed infants as a normal component of gut flora.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013205:2965110:2981254298125429831611908Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,drug resistance transporter, EmrB/QacA subfamily2e-0960.8
NC_020302:2677617:2684284268428426857741491Corynebacterium halotolerans YIM 70093 = DSM 44683, completelincomycin-resistance protein2e-0857.4
NC_009524:1796000:1800001180000118014761476Psychrobacter sp. PRwf-1 chromosome, complete genomeEmrB/QacA family drug resistance transporter2e-0651.6
NC_015759:667505:6675056675056688871383Weissella koreensis KACC 15510 chromosome, complete genomemajor facilitator superfamily permease2e-0651.2
NC_021182:909090:9136409136409150701431Clostridium pasteurianum BC1, complete genomedrug resistance transporter, EmrB/QacA subfamily2e-0651.2
NC_014616:462000:4663974663974680641668Bifidobacterium bifidum S17 chromosome, complete genomehypothetical protein2e-0651.2
NC_014152:927969:9286339286339302131581Thermincola sp. JR, complete genomedrug resistance transporter, EmrB/QacA subfamily5e-0649.7
NC_021182:3771523:3771523377152337729501428Clostridium pasteurianum BC1, complete genomedrug resistance transporter, EmrB/QacA subfamily5e-0649.7