Pre_GI: BLASTP Hits

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Query: NC_013941:3182576:3185823 Escherichia coli O55:H7 str. CB9615 chromosome, complete genome

Start: 3185823, End: 3186164, Length: 342

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The E. coli O55:H7 strain CB9615 was isolated from an infant with diarrhea in Germany in 2003 and confirmed to belong to the same sequence type (ST11) as the O157:H7 clone by multilocus sequence typing. The O55:H7 and O157:H7 E. coli clones have been shown to be closely related. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003198:1908238:191306519130651913406342Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative bacteriophage protein7e-46182
NC_010102:683444:708282708282708611330Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein4e-33139
NC_003197:2327474:233719823371982337527330Salmonella typhimurium LT2, complete genomeputative inner membrane protein4e-33139
NC_011083:2375061:238477823847782385107330Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,phage holin, lambda family4e-33139
NC_016810:2325190:233491423349142335243330Salmonella enterica subsp. enterica serovar Typhimurium strbacteriophage holin, lambda family4e-33139
NC_016856:2379027:238875123887512389080330Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative inner membrane protein4e-33139
NC_016857:2325190:233491423349142335243330Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative inner membrane protein4e-33139
NC_016860:2323017:233274123327412333070330Salmonella enterica subsp. enterica serovar Typhimurium strphage holin, lambda family protein4e-33139
NC_016863:2324293:233694323369432337272330Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative inner membrane protein4e-33139
NC_017046:2324554:233427823342782334607330Salmonella enterica subsp. enterica serovar Typhimurium str. 798bacteriophage holin, lambda family4e-33139
NC_013961:3413011:342446934244693424867399Erwinia amylovora, complete genomeHolin (Lysis protein 13)6e-26115
NC_013971:335247:346521346521346913393Erwinia amylovora ATCC 49946 chromosome, complete genomephage holin4e-25113
NC_014838:218000:237894237894238232339Pantoea sp. At-9b plasmid pPAT9B01, complete sequencephage holin, lambda family3e-25113
NC_015968:3301958:330616233061623306503342Enterobacter asburiae LF7a chromosome, complete genomephage holin, lambda family9e-25112
NC_011094:638552:664203664203664547345Salmonella enterica subsp. enterica serovar Schwarzengrund strphage holin, lambda family protein6e-1992.8
NC_020063:2565605:257256325725632572904342Enterobacteriaceae bacterium strain FGI 57, complete genomephage holin, lambda family7e-1992.4
NC_012779:2184927:219484621948462195193348Edwardsiella ictaluri 93-146, complete genomephage holin, lambda family, putative6e-1785.9
NC_012779:1939747:194568519456851945984300Edwardsiella ictaluri 93-146, complete genomephage holin, lambda family, putative2e-1168.2